 |
Simple sequence repeat (SSR)
>UN04301
TTTGAGGAGTTTTCAGTTTTCCGGCAAATTGTTCTCCTCATCAAACACCAAGAAGAAAAAACTTTGTTTGACAAGTTGGATCATTACATTGTTT
TCTGGTTTCGTCTTTTCTTTTTTTGTTCGATCACAGAAACAAACAAACAACGGAAAATCAGTTCTCTCCACAGAAAAAAATAAAATAAAAACAA
AGACTTTTCTTTCTTCTGCAAGTAACTGAGCAGATTTCGTTTTTTTCTTCCATTTCTGTTAAATAAAAAAATAAAAAAAAATTATTGTCCATAA
CTTCCGTTGCCCTTAAATTCAGCTGTCCTAACGTCAAAGCTCAGACACTCGCTTGCGTGTCTCCCTCTTAAACTCCCCATTCCTCTCTTGTTCT
TTTCCTCTGTTTCTCTCTGTTTCTGCCCTGTTTCTCTTCTTTTCTTCTCTGTTTCTGGGACATTTCAAACAAGGATCAAGAAACCCAATCTCCC
TCTCTCTCTCTCTAGAAAGGAATCATGGTGTTTGGAAAAGGGTCAATGAAAAAATCGAACCTTGACAAGTTCCTTCATTGCACAACGCCTGTAG
TGCCACCTCAATCTCTCCCCAAGACCGAGATTAGGAGTTTGAATCGGATTTGGCATCAACCAGAGAGAGAAAACATTGAGTATTTCAGATTGAG
TGATCTATGGGATTGCTACAATGAATGGAGCGCTTATGGAGCTGGTGTTCCCATTCGTCTCACTAATGGTGAATCTCTGGTTCAATACTATGTT
CCTTATCTCTCTGCTATCCAGATCTTCACATCTCGTTCCTCCTTGATCCGCTTAAGGGAAGAGTCTGAAGATGGAGAAAGCTCGTTTAGTGATT
CATATAGTGAAGAGAGTGAGAGTGATAAGCTTTCAAGAAGTGCTGCTTCTGATGAAGGGCTTGAGCATGACGCCATTCTACACCCCAATGATCG
TTTGGGCTATCTTTATCTGCAATACTTTGAGAGATCAGCTCCTTATGCTCGCGTTCCTCTCATGGATAAGATCAATGAACTGGCTCAGAGGTAT
CCTGGACTAATGTCACTGAGAAGCGTAGATCTTTCACCGGCAAGTTGGATGGCTGTAGCATGGTACCCTATTTATCATATACCAATGGGAAGAA
CCATCAAAGATTTGTCTACTTGTTTCCTCACTTATCACACTCTTTCATCTTCTTTCCAAGATATGGAGCCAGATGAAAATGGTGGGGAGAAGGA
GATGATTCGTAAGGAAGGAGAAGGAGTAACTTTGCTTCCTTTCGGTTTAGCGACTTACAAGATGCAAGGCAATGTTTGGCTCTCGGAAGATGAT
CAAGGTCAAGATCAAGAGCGAGTTCTATCTCTTCTAAGTGTTGCTGATTCTTGGCTAAAGCAGCTAAGAGTCCAACACCATGACTTCAACTACT
TCTCAAGAATGGCTCACCGTGGCTAAACAAATCGGTCACTGTACCGATGATTTTCAACTGTAGATTTTTTTTAATATTTGATTTTGCTTTTCTT
GCTTCTCTCAAGTGATTAGGAGACTACTTTTTTTCCTCTGGCCGCGAGAACCGTGTGTTGTCCAGTGGTTGGGGCAGCAGTGCCAGTGGCTGTG
GAGAAGAGGCTCAAACTGCTCAATTCAATTAAAGCGGTTCTTGCGCTTTGGGTGTAGAATATCTTTTGAGTCCTATCTATGGGAAGATCTGGTT
TATTATAAAGTGTTGATGTGTTGAAAAGAGTGTTTTCTTGTTTCTTGATAACATTGATTCTGAGGATCTTGTTCTTGTACCTCAGTAACAGTAA
ATATCACGATCTAATCATCTTTGTAATGTCTTCTTCATCCACCATGTGTTTTATTGATCAATAGATGATCTAATTTGATGT |
Primers for UN04301 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGTCAAAGCTCAGACACTCG |
59.77 |
20 |
ATTGAGGTGGCACTACAGGC |
60.142 |
20 |
263 |
314 |
576 |
| 2 |
CGTCAAAGCTCAGACACTCG |
59.77 |
20 |
TTGACCCTTTTCCAAACACC |
59.807 |
20 |
203 |
314 |
516 |
| 3 |
CGTCAAAGCTCAGACACTCG |
59.77 |
20 |
CACTACAGGCGTTGTGCAAT |
59.788 |
20 |
253 |
314 |
566 |
|
|
