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Simple sequence repeat (SSR)
>UN04323
GGGTGTTTCTTCTTCTTCCCCAATCTCCTTCCAAAGTCTCTCTCTATAATCGTGTCTTTCTCTCTCCATGTCCGAACGCATCCTGTCTCAAAAA
CCATCGATACAAACCTCGATCCTTCTCCACTAGCAACTGATCTACACGTCAAACAAAACGGTCTCGCGCATCTCTCTGTACAGCTATTATGGCC
GCCGTCTCCTCCGACCCTCGCACCGTCGAAGAGATCTTCAAGGATTACACCTCTCGCCGCGCCGCTCTTCTCCGTGCTCTCACCAAAGATGTTG
ATGATTTCTACTCTCAATGCGATCCGGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCGTGGGAAGTGAATCTACCGGCGGAGGA
AGTTCCACCGGAGCTACCTGAGCCTGCGCTTGGTATCAATTTCGCTAGAGATGGTATGCAGAGGAAAGATTGGCTCTCTCTTGTTGCTGTCCAT
AGTGACTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGTGCTCGCCTTAATCGCAACGAGAGGAAGCGGCTATTCAGTCTGATCAACGATCACC
CAACTCTCTTTGATGTAGTGACTGGTAGGAAACCAATCAAAGACAACAAGCCAAGCTCAGATTCCGGAAGCAAATCCAGAAACGGTGGCACTAA
TAGATCAATAGAAGGGCAGCCAAAGAGCACAACACCAAAGCTGATGGAAGAGATGTACGAAGAGGAGGAGGATGAAGAAGAAGAAGACGAGCAT
GGAGACACTCTCTGTGGAAGCTGCGGAGGCAATTACACACAAGATGAGTTCTGGATCGGCTGTGATGTCTGTGAACGTTGGTACCATGGCAAAT
GCGTGAAGATCACTCCCGCCAAAGCAGACAGCATCAAGCAGTATAAATGCCCACCTTGCTGTGCAAAGAAAGGAAGACAGTGATTGATCATCAT
CATCTCCCAGAGACTCTGGTTATCATGTCTTAAACGATATATTAATCAACCTTCCTTCTATCTTTTGTTTTTTAACCGTTTTAATTTTAAAGCA
TACAAAACTCTCTCTCTCTTTGGATCTCCGTAAAAGGAATTCAAGAAGTTGAGTGTGTAGCAACAACAACTGTTTTAAGTATTATTATTATTCA
GATAAGAAAACTGGTTTGTTCC |
Primers for UN04323 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATGCGTGAAGATCACTCCC |
60.081 |
20 |
TTCTTGAATTCCTTTTACGGAGA |
59.277 |
23 |
238 |
844 |
1081 |
2 |
ACGTTGGTACCATGGCAAAT |
60.118 |
20 |
TTCTTGAATTCCTTTTACGGAGA |
59.277 |
23 |
255 |
827 |
1081 |
3 |
AAAGCAGACAGCATCAAGCA |
59.746 |
20 |
TTCTTGAATTCCTTTTACGGAGA |
59.277 |
23 |
215 |
867 |
1081 |
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