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Simple sequence repeat (SSR)
>UN46442
GCTTGTCTACTTTAACAAACACGAAAGCTATTCTAGCTTTAGGATCGAACCGAAGCATTCTCGGCACAATAATCAGACCAGACCGGATTCTTTT
AGAGCGCAAAGGTGGGAAAAACGGAGATGTCACTTTCAACAGCTTGCTTCCCGGAGCAGGAGAGCCGTTGCCAATGTCGGCTAACGGCAAAAGC
AATGGAGGGCTTTTTTGCAACTGGCAACTCGAGGAAGACGAGGAAGGCTCGTTCCCTAGAGGGGATGCTGTGAATGGAGACAGTACTCCTCCTG
TACTAGTTGATACTCCTGGTAAGGTAACCACTAAAGAGTCTTCTCGGAAGAAGAAGAGTAAGAGCAAGAGCAAGAAGAAGGTGGTGGATGATTA
TGATGATGATGATGAAGAAGAACCGAGTTCGAAGAAAAGAAGACGGAAGAATAAGTAAGTATGAAACGGCAGGTCTGGCTCTGGCCACACTGAA
ATCAGCTGGAGGTTAGTAACCAGAGGAGGCCTCAGTCTTTCAGTGTAAATTATAATTTGGTAAAAACAGATATAATGCTGTTGTAACAAATTAA
AAATTTACCATCAGTTTTGAGTAGTTTCTAAATTTATGTAATGTTATTGAACATTGTTAAACTAAATTAATATTGTTCCGTTTTTAAGTTACG |
Primers for UN46442 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACTGGCAACTCGAGGAAGA |
59.989 |
20 |
CCAGACCTGCCGTTTCATAC |
60.517 |
20 |
248 |
207 |
454 |
2 |
AGCAAGAAGAAGGTGGTGGA |
59.844 |
20 |
AGACTGAGGCCTCCTCTGGT |
60.404 |
20 |
158 |
351 |
508 |
3 |
GAGCAAGAAGAAGGTGGTGG |
59.844 |
20 |
AGACTGAGGCCTCCTCTGGT |
60.404 |
20 |
159 |
350 |
508 |
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