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Simple sequence repeat (SSR)
>UN00460
TTTTTTTCTTTCCCTCAATCCAAAGCTTCCTCTTCGTTTTATTATAACCAATCTTCATATCTTTCCTGAGTTAGCAATGGCCGTTGGTGAGGTA
ATGAGGATGGATATACCAGCCGGTGGAGATTTAACAGTTACTTCGCCGGAGTTACATGTTCTCGCCGTTGATGATAGTATTGTGGATCGTAAGG
TCATTGAGAGATTGCTAAGGATCTCTGCTTGTAAAGTGACCACTGTAGAGAGTGGGACTATGGCTTTGCAGTACCTTGGCTTAGATGGAGACAA
AGGAGCTTCTGGTCTTAAGGATTTGAAGGTGAATTTGATAGTGACGGATTACTCAATGCCAGGACTAACAGGATATGATCTCCTTAAGAAGATT
AAGGAATCTTCTGTTTTCAGAGAAATACCAGTTGTGATTATGTCATCTGAGAACATCTTACCTCGTATAGAACAATGTCTGAGAGAAGGAGCAG
AGGATTTTCTGTTAAAACCGGTGAAACTAGCCGATGTTAAGCGGATAAAAGAACTTATAATGAGAAATGAAGCAGATGATTGCAAAACCTTAAG
CCATTCTAACAAAAGAAAACTTGCAGAAGACATTGATGATACAACATCACCATCACCATCATCATCATCATCATCAAGTCCTGATGATTCTTCT
GTCGAGGACTTTCCATCTTCAAAACGGATGAAATCAGAGCTTTCTTCTCTCCTTTGAAATATATATAGAGCCAAGACTTTAGCTAATGTCTGTT
AATATTCATCATCTATGTTTTCGTTCATTAAGTTTTGTTTTCGGGTCAATACAAGTTTTGTTTTCGGGCC |
Primers for UN00460 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCCGATGTTAAGCGGATAAA |
60.061 |
20 |
TGGAAAGTCCTCGACAGAAGA |
59.974 |
21 |
174 |
500 |
673 |
2 |
GCCGATGTTAAGCGGATAAA |
60.061 |
20 |
CATCCGTTTTGAAGATGGAAA |
59.924 |
21 |
189 |
500 |
688 |
3 |
CGGTGAAACTAGCCGATGTT |
60.132 |
20 |
TGGAAAGTCCTCGACAGAAGA |
59.974 |
21 |
185 |
489 |
673 |
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