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Simple sequence repeat (SSR)
>UN46592
GGGTAAGAATAAAATTTGAAATTCAAACGCTCCTTTTTCTCTCAAACCTACTTCAACTTCCCCCTCTCTCTCTCTCTTCCACGATAAACCCTAA
AAATTCAATTAAGTCTTCTTCACTATGACTCTTGTACCATCCATAGGTCGCGAGCTCTCGAATCCACCGTCCGATGGAATCTCTAATCTCCGGT
TCTCCAATACCAGCGACCATCTACTAGTCTCTTCATGGGATAAGAGTGTGAGATTGTATGATGCGAACGCCGATTCGATGAAAGGAGAGTTCAA
ACATGGAGGAGCGGTGCTCGATTGCTGCTTCCATGACGAGTCTTCTGGGTTCAGTGCCTGTGCCGATCATAAAGTTAGACGAATTGACTTCAAT
GCTGGCAAAGAGGACATTCTCGGAATGCATGATGAACCGGTTCGTTGTGTTGAGTATTCTTATGCTGCAGGGCAAGTGATCACTGGAAGCTGGG
ATAGAACGATTAAATGTTGGGACCCGAGAGCTGCGAGTGGCCCGGAGCGTTCACAGATTGGAACATATAAGCAACCTGAGCGTGTTAACTCTCT
TTCTCTCGTTGGAAATCATTTGGTTGTGGCGACAGCAGGGAGGCATGTCAACATTTATGACCTGAGGAATATGGCCCAGCCTGAGCAGAGAAGG
GAGTCCTCACTTAAGTACCAGACCAGATGTGTGCGTTGTTATCCCAATGGAACAGGGTATGCACTTAGCTCTGTTGAAGGAGGGTTTCATGGAG
TTTTCGATCTATCAGAGGCTGCTCAACTAAA |
Primers for UN46592 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCTCCTTTTTCTCTCAAACC |
60.359 |
21 |
CTCTCCTTTCATCGAATCGG |
59.767 |
20 |
250 |
28 |
277 |
| 2 |
CGCTCCTTTTTCTCTCAAACC |
60.359 |
21 |
CGCTCCTCCATGTTTGAACT |
60.255 |
20 |
268 |
28 |
295 |
| 3 |
CAAACGCTCCTTTTTCTCTCA |
59.618 |
21 |
CTCTCCTTTCATCGAATCGG |
59.767 |
20 |
254 |
24 |
277 |
|
|
