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Simple sequence repeat (SSR)
>UN46636
GGACCACCCCTGTATTAAAAAAAAAATCGGAAAGGAAGAAGATAAAAAAAATAAATGGCTGCTTCCTTATCCACCTCCGTTGTAGCTTCGGCTT
CGTCGCGTTTGTGGCACCCTGCTTCCAACGCCGGGAAGATTAGCGTCCCTTCGGCTTCGCTTTCTCTCCGCTCTGGTTCGAGACGGAGTCAGTT
TTCTCTCGGCGGCTTTTCCGCCTCAGCTTCTTCTCAGCTGCTCCATTGCTCCTTCCTCTCTTCATCTCTCTCCCTATCCTCTACATTTTCTGGT
TTGTCCATAGCATTTGATGTCAGCAGTGGAACCAGTGGCTTGAACGGGCAGAAGAAACGTAGAGGGCTTGTTGTGAGAGCTGGAAAAGCTGCTC
TGTGTCAAACAAAGAGAAGCAGGTCAAGAAAATCTCTGGCTAGGACTCATGGTTTCCGTCTGAGGATGAGAACCACTAGTGGTCGAGCCACCAT
CAAGCGCAGACGTGCCAAGGGACGTTGGAATCTCTGTCCTAAGTCCAACCCTAGCAGCGGCAAACGGGCTTGAAGACTGTTTCCTTTCCCTCCT
CGTTCTCTCTCTCTCTCTGTATTCTTGGCTTTTTTCCGCCAGATGATACAATGACACGAACAGATGAGCTATTTTCTGTATTTTATTTAACTCC
TTATGTATTCTTGATTCGTTTAAAAAAGAAAAAA |
Primers for UN46636 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTGAGAGCTGGAAAAGCTGC |
60.285 |
20 |
TCATTGTATCATCTGGCGGA |
60.033 |
20 |
264 |
355 |
618 |
2 |
AGAGGGCTTGTTGTGAGAGC |
59.604 |
20 |
TCATTGTATCATCTGGCGGA |
60.033 |
20 |
276 |
343 |
618 |
3 |
TAAGTCCAACCCTAGCAGCG |
60.399 |
20 |
TCATTGTATCATCTGGCGGA |
60.033 |
20 |
109 |
510 |
618 |
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