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Simple sequence repeat (SSR)
>UN46687
AAATAGAACCAAACAAAACCAATCTCCTTATTAGAAGAAGCATGAACATAGTGTCCGTCCGGGCTCTCTCTCCGCCCTCCAGTAACTATTTTCC
ATTGATTATATAGTTTTTCAACAATAACAATTGTGTGTTTTTTCTTTTCATATGAATTATATATAACGTACATGTGCTGATGTGCATGTTTGAG
TTTGCAACGAGATATCGTTTTAATCTGTGAAATTTAATCTGTTAGGGTTGTTACATCGTGCCGAGAGATGTAGAGTGGGAGGGAGAAACTACGA
AAAGCCTGAACTTAAACAAAGCAACTTCTCAAAAGACGAAGACGATCTCATCCTTAGGCTTCATGCACTTCTTGGCAATAGATGGTCATTGATA
GCGGGAAGGTTACCTGGACGAACTGATACCGAAATAAGGATCCATTGGGAAACTTACTTAAAGAGGAAACTCATGAAAATGGGAATAGACCCAA
CCAACCATCGCCTCTACCATCACGCAAACTACATTTCAAGACAATACCTCAGTTCTTCTCATAAGAAACTTGAAACAGATATCGTTAGTGACCA
ATCTTTTTCGGTGTCCGAATCATATGATATGAGAATATTACCCGTTTCAAGTACCAATTGCTTTGATGATAGTGCTAGTAGTAGTGCCGGACAT
AGTCGTTTGCCTGATCTCAACATTAGTCTCGTCCCGGCCGAGACGGTGGTTTCTTGGCCAGGTTGTGGCCTTCAAGAATCTAGCAGCAATGGTT
CAACGCGTCAAGAAACACTTCTTCTTTTCCGGTGAAATCGGATATTTTTTTTCCTACATAAAAAATGGTGTATTTGTTTGTACTATTTTGCTAT
GTATATATATATATTTCTTTTTTGTAATCACTAGATAAAAATACTCAATTGGGAGATAATAAATGATATCC |
Primers for UN46687 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTTCAACGCGTCAAGAAACA |
59.888 |
20 |
TCCCAATTGAGTATTTTTATCTAGTGA |
58.686 |
27 |
151 |
750 |
900 |
2 |
TTCAACGCGTCAAGAAACAC |
59.888 |
20 |
TCCCAATTGAGTATTTTTATCTAGTGA |
58.686 |
27 |
150 |
751 |
900 |
3 |
CTTCTTTTCCGGTGAAATCG |
59.679 |
20 |
TCCCAATTGAGTATTTTTATCTAGTGA |
58.686 |
27 |
128 |
773 |
900 |
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