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Simple sequence repeat (SSR)
>UN46919
GGGTTCTTCTTCTTTCTCGGCTCCTCCCCCACCTCTCTGTTCTTCTTCTTCCATCTCCCATCTTCACACCACCTCTATCTTCGTGCTTGGCTCC
ATCTCCACACCACGACCCCTAACTTCTGCCATCTTCACTTGTCTCTGCCGCATTCATCACGGCAAGCTCATCCCGTTCACCTATGTGACATGAC
TATCTAACACCACAACGCCATACCTCCTCTGTTATCTGTACCAAAATCATAACAAAATCAGAGAGAGAGAGAGAGAGACAGAGAGACAAAGACA
GACACATAGAGAAAGAGAGGTTGATGGTATCAGACGGCGATGTTGGTGACGAGTGGTGGTGGTGTCGGATGGAGATGGTGGTTGTGTTGGTGGT
GGTGTTGTGGTCACGAGTGACGATTTCAAAAGGAAAGGATTGCAGAGAACGTTATGAGAGATTTAAGAGATGAGATTGCAGAGGAATGTGAGAA
GAGATTACAGAGATGATAATTAAATTTGAGATCTACCAGAAGAAAAGCAAACGTCGTGACTTGGAAAACAAAAAGAATAAAGAATAAATAATAA
TGGTATCCGTTAGATTGAAGTTTATCAAACGGTGGAGATTAACAGTTTAGTTATCCTCACCCTTTTAAACTGGCTTCTCCCATTGGTTAAGATT
TTTACTCTTTGTTTTTCTTTAATTTGTTGTACTCTATTTTTTTTTTTAATGTTTAGTATATCTCATAGTTTTTTTTAATTTTGTGGTTGATAAT
TTACTTAATATTATAATTGTAGGTTTAAATAATAAAAATATTAGAATTGT |
Primers for UN46919 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTATCTTCGTGCTTGGCTCC |
59.978 |
20 |
CACCACTCGTCACCAACATC |
60.005 |
20 |
266 |
75 |
340 |
2 |
CCTCTATCTTCGTGCTTGGC |
59.978 |
20 |
CACCACTCGTCACCAACATC |
60.005 |
20 |
269 |
72 |
340 |
3 |
CACACCACGACCCCTAACTT |
59.884 |
20 |
CACCACTCGTCACCAACATC |
60.005 |
20 |
241 |
100 |
340 |
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