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Simple sequence repeat (SSR)
>UN46961
TTTTTAAAAAAAAATTCGGATTTGATGTTGTTTTTGCTTTTTGAGCTTTTGTTTTTTTCATGTAAACTAAAATGATCGACTTGTATTGGGACAT
TTGTGCAGAGGAGACGACTACTATGAGCAGCAGCAGAGATCATCATCATCATCCACCCGAGCCTCTTGATTTCTTCATCTGGACTGTTGAGGAT
GTTGGATCTTGGCTTGAGGAGATCACCCTTGGGAGCTACCGCCTGATTTTCAAAGAAAACGGCGTCAATGGAGAATATCTAGAAAGCATGTCTG
TGTTTACAACCGAACAGATCCTTCATTTCATAAGGAGGCATCACATGAAATGGGGAGATTTCATCACTCTCTGTAAAGAACTCAGAAGGATCAA
AGTGGCTTGCTTGAAAGGCGAGCAGAGAGTTCGAAGGCCTTGGTGGGCACCGTCTTGCCTCTCTGTAGTCTTTGTTAAGGCCGCTAAGCGCAAC
CGACAGTCTCGAGTTGTATCTCTAAAGCTTGAATCTTGACAATTACACGCTGGCTCTCTCTTTATGTACCTACTTGTCTCTCTTCTCATCCCTT
TCTTTTCCTTTTTCTTTTTTTGGGTTGAGTTTGTTTGTAGAGATAAAAGCTATATGCACTATGGAAAAAAAAACAAATTGGAGCCAAAAAGCTG
TTTTGGCTTGTTAAAGTCTTGCAAGAAGGGAAAAATTATAGTTTTCTACTTTGGTTGTATACAGAGCTTGCTCTCAGATGTTTAAGC |
Primers for UN46961 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CATTTGTGCAGAGGAGACGA |
59.984 |
20 |
TTTCTTTGAAAATCAGGCGG |
60.181 |
20 |
155 |
92 |
246 |
2 |
CATTTGTGCAGAGGAGACGA |
59.984 |
20 |
TCCTCAAGCCAAGATCCAAC |
60.195 |
20 |
117 |
92 |
208 |
3 |
CATTTGTGCAGAGGAGACGA |
59.984 |
20 |
TTTGAAAATCAGGCGGTAGC |
60.209 |
20 |
151 |
92 |
242 |
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