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Simple sequence repeat (SSR)
>UN47004
GGATCCTTAAAAAAAAATCCCGGGTCGATTCAGAACCCTAAGCGGTGCCATCCTCAACACCACAACAACTATGGCTGAACCCGATTCTCCTCCT
CCTCCTCAGCTGAACTTACCTTCTTTCGTTGTCAACCTGTTCCCCTTCCTCAAACCTAAGTCTCCTGCTTCTTCTGCTAACGTTGCCGATGGTG
GTCCTAAACCCGCGGGAGGAGATAAGGAGACTCAGAACTCGACGGTCTCTTTCCCTTACAATCCTCCCAAGAGCACTGAGCCACTCAAGGTTGA
AGCCGAGCCTAGCTCCGGGACCACTTCCAATTCCCTCGTCATTTGGCAGGTATATGCACTTGGAGGGTTTCTTGTCCTGAAGTGGGCTTGGGCG
AGATGGAATGAGAGGAACGAGAACAAGAAGTCAACGGATGATGATGATGATGATCAAGTTCCTCATCCCGAAGATGATTGATTGATGATGAAGG
CTTGGTCATATTTGCACGACGAAGGCAATGAAATCTTTTACCCCCATTTTGGTTCTGTATAGCAAAAACACCCTTTCAGATTTTCTTATATTCC
ATTGTATCTCTACTCAAGACTCTATTGAGTTTCTTCTACTTCTGTAATGACTAGTACGATTCTCCTCTCTCAATCCAGTTTCTTTTTTCCCCC |
Primers for UN47004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AACAACTATGGCTGAACCCG |
59.993 |
20 |
CCGTCGAGTTCTGAGTCTCC |
59.986 |
20 |
170 |
64 |
233 |
| 2 |
AACAACTATGGCTGAACCCG |
59.993 |
20 |
ACCTTGAGTGGCTCAGTGCT |
60.057 |
20 |
216 |
64 |
279 |
| 3 |
AACAACTATGGCTGAACCCG |
59.993 |
20 |
GTCTCCTTATCTCCTCCCGC |
60.176 |
20 |
156 |
64 |
219 |
|
|
