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Simple sequence repeat (SSR)
>UN47004
GGATCCTTAAAAAAAAATCCCGGGTCGATTCAGAACCCTAAGCGGTGCCATCCTCAACACCACAACAACTATGGCTGAACCCGATTCTCCTCCT
CCTCCTCAGCTGAACTTACCTTCTTTCGTTGTCAACCTGTTCCCCTTCCTCAAACCTAAGTCTCCTGCTTCTTCTGCTAACGTTGCCGATGGTG
GTCCTAAACCCGCGGGAGGAGATAAGGAGACTCAGAACTCGACGGTCTCTTTCCCTTACAATCCTCCCAAGAGCACTGAGCCACTCAAGGTTGA
AGCCGAGCCTAGCTCCGGGACCACTTCCAATTCCCTCGTCATTTGGCAGGTATATGCACTTGGAGGGTTTCTTGTCCTGAAGTGGGCTTGGGCG
AGATGGAATGAGAGGAACGAGAACAAGAAGTCAACGGATGATGATGATGATGATCAAGTTCCTCATCCCGAAGATGATTGATTGATGATGAAGG
CTTGGTCATATTTGCACGACGAAGGCAATGAAATCTTTTACCCCCATTTTGGTTCTGTATAGCAAAAACACCCTTTCAGATTTTCTTATATTCC
ATTGTATCTCTACTCAAGACTCTATTGAGTTTCTTCTACTTCTGTAATGACTAGTACGATTCTCCTCTCTCAATCCAGTTTCTTTTTTCCCCC |
Primers for UN47004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGCCACTCAAGGTTGAAGC |
59.997 |
20 |
GATTTCATTGCCTTCGTCGT |
60.081 |
20 |
240 |
266 |
505 |
| 2 |
CCTCGTCATTTGGCAGGTAT |
59.955 |
20 |
GATTTCATTGCCTTCGTCGT |
60.081 |
20 |
190 |
316 |
505 |
| 3 |
AGCACTGAGCCACTCAAGGT |
60.057 |
20 |
GATTTCATTGCCTTCGTCGT |
60.081 |
20 |
246 |
260 |
505 |
|
|
