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Simple sequence repeat (SSR)
>UN47024
CAAACAGCCAACCAAAACCAAACATATCTCTCTCTCTCTCTCTCTCTCTCTCGCTGCTTTCAATGGCTTCCTTGCTCGATTCCGTCACCGTTAC
TCGCGTATTTTCTCTTCCGATCACTTCGTCTGCTTCAAAGGTTCCGTCAGTTTCCGCACGGCGGATTCCGGAATTCAGAGGTTTGAAAGCTTCG
CGACGGAGTTCGGTGACTCGGTCGGCTGGTCTTGGTACGAATCTCGGATCCCGATTTGCTCGTGGTGGTCGAATCGTCTGCGAGGCTCAGGACG
CCACTGCCGCCGCCGTGGAAGTACCAAACATCTCTGATTCAGAATGGCAAACACAGGTTCTCGAGTCAGACGTACCGGTATTGGTCGAGTTTTG
GGCACCATGGTGTGGACCTTGCCGTATGATTCACCCCATTGTTGACCAACTGGCCAAGGATTTCGCAGGCAAGTTCAAATTCTACAAAATCAAC
ACCGACGAGAGCCCAAACACAGCCAACCGTTACGGTATACGCAGCGTTCCCACGGTGATCATATTCAAAGACGGTGAGAAGAAAGACAGTATCA
TCGGAGCTGTCTCTAAAGAGACGTCGGAGAAAACTATAGAAAGATTCGTGGTCGAGTAACTAAACAAAAAAAAACAACAAATTTCACTCATGTC
TTCTGTGTTGTATAATTCTTCGTAAGGTTTCTTTTGACTATTTATGTTTCCATTCGCCTACTTGTCTTGTTTAGTATTATGAAAAAAGGGAATA
ACGAACAATAATTACTCC |
Primers for UN47024 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
ACAGCCAACCAAAACCAAAC |
59.875 |
20 |
CGGAAGAGAAAATACGCGAG |
59.975 |
20 |
110 |
4 |
113 |
| 2 |
ACAGCCAACCAAAACCAAAC |
59.875 |
20 |
TGAAGCAGACGAAGTGATCG |
60.136 |
20 |
128 |
4 |
131 |
| 3 |
AACAGCCAACCAAAACCAAA |
60.378 |
20 |
CGGAAGAGAAAATACGCGAG |
59.975 |
20 |
111 |
3 |
113 |
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