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Simple sequence repeat (SSR)
>UN47052
GGGACGACGATATTTATTGGTTTCCTTTATCTTATATATTTTTTTGGTAGGCTAAGTTTTTAAAAGGAAACTAAAGTGTTGCCTCCATGTTTTG
AAATGACTAATTTAGTTAGTTAAAACAATTCAAATAGTCTACAATCATGTTGCCTGTAAATATGATTAGAAAAGAGGTTAAAAGTGACAAATTT
AAGAGAAACACCGAGAGACTGAACACCATCATTATATATATATACTTTGTCATCACAACATAATGGGCTAAAATATGATTGCATATCGATAAAA
TTGTATTTATTAATTACAATGTCGAATCATTTATTAGATTCACAAGTTATATTATACTCCACATTTGTGTTCAAAAAAAATATTATACTCCACA
TTTTTGTTGGAGAAGGAATACCATGAAACAAGTGGTGCGAGTGTGTAAGACTTTTGTCATTTTGTTTTGGAACATATACAAAAGACACACAAGT
GGTGAGTGAGTGGTAATAATAATAATAATTTGTAAATTGTACATGTAAATAAAGATAACAGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAG
ACATGCACCAAAGGAAAGCTGAGATGGCTAAGCACTCTGATGCTTTTATTGCTTTACCTGGTGGATATGGGACACTTGAAGAGCTTCTTGAAGT
AATCACTTGGGCACAGCTTGGAATCCATGATAAACCAGTAATCAATTTGCATCCATTTCAATTTACATTATATATAAATAATTAAAAATAACTA
TTTTGAATGTATTATTGTTTAATTTATATATGAATGTGAAGGTGGGATTACTGAATGTGGAAGGATACTACGATTCTTTGTTATCATTCATAGA
CAAAGCAGTGGAAGAAGGTTTCATTGCACCAACTGCTCGTCATATCATTGTCTCTGCTTCTTCTGCTAAAGACCTTGTCAAGAAACTCGAGGAA
TATGTACCAAGGCATGAGAAGGTAGCCTCAGAGAAAAGCTGGGAGATGGAGCAAATAGGGCAGAGTCCCACTTGTGAAATCTCAAGATGAAAAG
GATAAAGCCCAACTGAATTTTTTTCTAAATTGGGTTCCTTGTTGCTTGTAAAACACAAATTGACTTTATTTGTGTAGTTTATTCTGTTGTTTAA
TGTACTTTTAGCATTTTATTTCGG |
Primers for UN47052 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CACCGAGAGACTGAACACCA |
59.864 |
20 |
CACACTCGCACCACTTGTTT |
59.794 |
20 |
225 |
197 |
421 |
| 2 |
CACCGAGAGACTGAACACCA |
59.864 |
20 |
ACACACTCGCACCACTTGTT |
59.232 |
20 |
226 |
197 |
422 |
| 3 |
CACCGAGAGACTGAACACCA |
59.864 |
20 |
ACACTCGCACCACTTGTTTC |
58.78 |
20 |
224 |
197 |
420 |
|
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