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Simple sequence repeat (SSR)
>UN47070
GGACTTCTCTTTTAATTTTATCCGGTCCGGATCTCTCTCTCTCTCTCTCCGACACAGACACACTCTCTCTCTCTCTATATCTCTTCGTGTAAGA
CACTGGTGTGACTGTTTTTTTAAGGCGGGGAAAATGTCTGGAAAAGGAGCGAAAGGGCCGATAATGGGGAAATCAAGCGGTAACGACAAGGACA
AAGACAAGAAGAAACCCACTACTCGCTCTTCTCGTGCTGGTCTTCAGTTTCCAGTTGGGAGAGTCCACAGACTGCTGAAAGGAAGGTCAACCGC
TCACGGACGCGTCGGCGCAACCGCCGCGGTTTACACGGCCGCTATTCTGGAGTATCTGACCGCAGAAGTCTTGGAGCTCGCTGGTAACGCGAGC
AAGGATCTTAAAGTGAAGCGTATCACACCCAGGTATCTTCAGCTCGCTATTCGCGGTGACGAAGAGCTCGATACTCTCATCAAAGGAACTATTG
CTGGTGGTGGTGTCATTCCTCATATTCACAAGTCCCTCATCAACAAATCTGGCTAAGAATAGTTCCTCTCTTTCTCTACTTCATCATCTCTGTC
TCTTTTGGATCTTTTTGTTTGTTAAATAGTCGTCTATGTTTTAAGATACTAGTGGAGATACTGTTTGTTTGTTTGTTTGTTTAAGACTCACGTG
TGACTTGTTTCCCTCGTTTCTGATTAGTGTTTTGGTGTTTGTTCATGTG |
Primers for UN47070 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCTCTTTTAATTTTATCCGGTCC |
59.004 |
24 |
CCTTGTCGTTACCGCTTGAT |
60.132 |
20 |
181 |
5 |
185 |
2 |
TTCTCTTTTAATTTTATCCGGTCC |
59.004 |
24 |
CGAGAAGAGCGAGTAGTGGG |
60.149 |
20 |
218 |
5 |
222 |
3 |
TTCTCTTTTAATTTTATCCGGTCC |
59.004 |
24 |
TCGCTCCTTTTCCAGACATT |
59.813 |
20 |
142 |
5 |
146 |
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