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Simple sequence repeat (SSR)
>UN47070
GGACTTCTCTTTTAATTTTATCCGGTCCGGATCTCTCTCTCTCTCTCTCCGACACAGACACACTCTCTCTCTCTCTATATCTCTTCGTGTAAGA
CACTGGTGTGACTGTTTTTTTAAGGCGGGGAAAATGTCTGGAAAAGGAGCGAAAGGGCCGATAATGGGGAAATCAAGCGGTAACGACAAGGACA
AAGACAAGAAGAAACCCACTACTCGCTCTTCTCGTGCTGGTCTTCAGTTTCCAGTTGGGAGAGTCCACAGACTGCTGAAAGGAAGGTCAACCGC
TCACGGACGCGTCGGCGCAACCGCCGCGGTTTACACGGCCGCTATTCTGGAGTATCTGACCGCAGAAGTCTTGGAGCTCGCTGGTAACGCGAGC
AAGGATCTTAAAGTGAAGCGTATCACACCCAGGTATCTTCAGCTCGCTATTCGCGGTGACGAAGAGCTCGATACTCTCATCAAAGGAACTATTG
CTGGTGGTGGTGTCATTCCTCATATTCACAAGTCCCTCATCAACAAATCTGGCTAAGAATAGTTCCTCTCTTTCTCTACTTCATCATCTCTGTC
TCTTTTGGATCTTTTTGTTTGTTAAATAGTCGTCTATGTTTTAAGATACTAGTGGAGATACTGTTTGTTTGTTTGTTTGTTTAAGACTCACGTG
TGACTTGTTTCCCTCGTTTCTGATTAGTGTTTTGGTGTTTGTTCATGTG |
Primers for UN47070 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCTTCAGCTCGCTATTCGC |
59.719 |
20 |
AAACGAGGGAAACAAGTCACA |
59.624 |
21 |
267 |
411 |
677 |
2 |
GGAACTATTGCTGGTGGTGG |
60.375 |
20 |
AAACGAGGGAAACAAGTCACA |
59.624 |
21 |
217 |
461 |
677 |
3 |
CCCTCATCAACAAATCTGGC |
60.461 |
20 |
AAACGAGGGAAACAAGTCACA |
59.624 |
21 |
174 |
504 |
677 |
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