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Simple sequence repeat (SSR)
>UN47085
GGGTTCCCTTCGAATCTAAAACCCATTAGATCTCTCTCTCTCAATCTGATCGTCGTTCAATCAATGACGTACAGCGACGTCGCCGATAAGCCGG
TACCTGAGCTGAAACTAAGGATGGAGGATTCCGGAAACGGAGATTATGTGAAATTGAGAGGAGGATCGGATGAAGAAGAACAAGGATCTCCCGC
GGAATCATCGTTAGGGTCTGTCTGGTTCTGGGTTAAATCGATCGCCCTCGTCGCTTGTGTTGGTGTATTAGCATTTGTAATTATTAAATGGGTT
GCTCCGTTTCTGATCGAAAAGGAACTGATTCCGTTTATAAATTGGGTGAGGAGCACATTCAGCATCCCGGTGCTAGGTCTTCTCCTCTTTGCCT
CGGTTGCTTCGTTCCCAAGCATTCTTCTTCCTTCCTCTCCTTCCATGTGGATGGCTGGTCTTACCTTTGGTTATGGCAAAGGCTTTCTGTTGAT
TCTGTCAGCAGCATCAATCGGTGTTACTCTTCCTTTCTTGATCGGACATCTCTTCCTCCACAAGATGTAAGAATGGTTGTAGCAGTACCCGAAA
GAAGCAGCTATACTTCGAGCCGCGGGTGAAGGAACCTGGTTTCATCAGTTTCAAGCAGTCACGTTAATCCGTGTCTCGCCATTCCCTTACATGA
TTTACAACTACTGCGCATTAGCCGCTGGAGTTCACTACAGTCCTTACATCTTAGCTCTCTTGTCGGATGGTCCCTGAGATATTCGTCTCATCTA
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Primers for UN47085 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCTTCGAATCTAAAACCCA |
59.016 |
20 |
GCGATCGATTTAACCCAGAA |
60.038 |
20 |
228 |
6 |
233 |
2 |
CCCTTCGAATCTAAAACCCA |
59.016 |
20 |
ATACACCAACACAAGCGACG |
59.64 |
20 |
251 |
6 |
256 |
3 |
TTCCCTTCGAATCTAAAACCC |
59.429 |
21 |
GCGATCGATTTAACCCAGAA |
60.038 |
20 |
230 |
4 |
233 |
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