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Simple sequence repeat (SSR)
>UN47139
GGACTTCTTCATTATTCTCTCAAACACAACTCCTCTCTCTCCCTCTCTCTAAATGGAGAAAACTCTAGCAACTCCCGACAACACTAGATCTGTT
TCAGTGTTGTGCTCAGCCGCCGTGAAAACACGCTTTGGTGGTTTCGAGCGCAGAACCAAACGGAGATTGTCGCAGACGAAGGCAAGCGTGCGTG
TGTTTGGTGAAGAAGATGAAGAAGAAGAAGAAAAAGAAGAGGTAAAGGAGAAGATCGAGGCGTTGAAGAGGATAATTCCAGGAGGAACGGCGCT
TGGTGTGGACGAGCTATTCGAAGAGACAGCTGGTTACATAATGTCTTTACAATGTCAGATCAAAAGCATTAAAGTCCTCACTTCATTTTTCCAA
CGCTTAGATAAACAAGACATGAAGTTCGGAGGTTGAAGATGATGATGGCACCAAGATTGCTCTTCTTTATATTTAATTTAATTTTAGTTCTTCT
TTTTCCTTTTTTAATATGGCTTTTAGCTTTGATATATGGGGAAAGAGATCTCAGCATTTTTTTTTTTCGAAATCTTTTTCTTTACCAAGACTTT
AAAGTTATGATTTATTCAAGCCGGTTCGTAGTTATGACAAGTGTTGATTGGGATATTACATTAGTAAGTAGGAGTATATATTAACG |
Primers for UN47139 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAACACGCTTTGGTGGTTTC |
60.015 |
20 |
ATAGCTCGTCCACACCAAGC |
60.285 |
20 |
180 |
120 |
299 |
| 2 |
AAACACGCTTTGGTGGTTTC |
60.015 |
20 |
GCCGTTCCTCCTGGAATTAT |
60.286 |
20 |
160 |
120 |
279 |
| 3 |
GAAAACACGCTTTGGTGGTT |
60.015 |
20 |
GCCGTTCCTCCTGGAATTAT |
60.286 |
20 |
162 |
118 |
279 |
|
|
