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Simple sequence repeat (SSR)
>UN47142
GGAACTTCCAAAATCTCCAGTCCCGTCTGCGAGAGCTAGCAGCAGCGATCGAGGATTAAAACAAAAACAAAAAAAAGTTGCTGGAGAGATGGCT
GATCCAAAGAAGGGGCGTGTACAATGGGATGAAGCTAATATAGTGGAAATTGGATCTAACAAACCTGTTAGGCAGAAGATCACTGAACCTAAGA
CTCCCTACCACCCCATGATTCATGATGATGATGATGATGTTGATGTTGGTGATGGTACTTTGTCTCCAAGAGGAGGAAGATCCTTCAACGAATG
CGTTGATGATATGCAACGTGCGGAAGAACTAAAGAACGCTCTGAATGGTGAATCAGCTTCTTCCAGTAGAAATGCTAGCCAGGGCTCTGGTTCT
GGTGGTGGCTGGAGCTCCGCTGAGGATGATGAAGCAGATCCAATGGATCAAGATGGTTTGGAAGGTGAGAAAAATGAGAGGTTCAGTGAACACA
GAAGAGTGCATTACAATGAGTTCCACAAGGTGAAGGAACTTAGGTCCTTGGGGTCCTTCTATGATGATGAAGAAGAGGACGAGGATGATGATGG
CTCCAAAGGAAGTGAAGCTGAGACAACAACCTCACCACACAGTAAAGGCGTTAACAAAGAGGGGAAGTCATCTTCATCCTCCAGTTGATGATAT
GATATGATACCTCTGTTCAATCAAGCGTGTACTCTTGTCCACGTTTTATAGATCTCTCTCTCTCAATCTTTAAACCTTTTTGAAAGGAAGAGGA
ACAAGAAAACAAAAATCAAGATTCTGAAACTAAGTTATGCTGTTACGGCATTTTAATGCAATTGCTTACAATCACTACTCC |
Primers for UN47142 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATGGCTCCAAAGGAAGTGA |
60.195 |
20 |
TTGCATTAAAATGCCGTAACA |
59.121 |
21 |
254 |
560 |
813 |
2 |
ATGGCTCCAAAGGAAGTGAA |
59.67 |
20 |
TTGCATTAAAATGCCGTAACA |
59.121 |
21 |
253 |
561 |
813 |
3 |
GATGGCTCCAAAGGAAGTGA |
60.195 |
20 |
TTGCATTAAAATGCCGTAACAG |
60.023 |
22 |
254 |
560 |
813 |
|
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