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Simple sequence repeat (SSR)
>UN04435
GGATAGAAAAAAATCTCAACTAGATTCACAACCTCCACACACTTCCAAAACATAAAGAGAGAGAGAGAGAGAGATGAACAAGAACCCTATGGTA
CCTTGTTCTTGAAATTAGGGCATATTTCCTTTCTCAAGACGACCATAAAGAACTATAAAAAGACCAGATATCAGAATTTTTGTGTGTCTGTATA
TAGATAAGCATTTACATACCCATATATATACAAGAGGAAACTGTAGAGGAACAAAAAAAAAATGGGAAGGGGAAGAGTGGAGCTGAAGAGGATA
GAGAACAAGATCAACAGACAAGTAACTTTTGCAAAGCGTAGGAATGGTTTGTTGAAGAAAGCTTATGAACTGTCTGTTCTTTGCGATGCTGAGG
TTGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAGCTCCCCAAACATGATCAAGACACTAGAACGGTACCAGAAATGCAG
TTACGGTTCTATTGAAATCAACAACAAACCTGCCAAAGAACTTGAGAACAGCTACAGAGAGTATCTGAAGCTAAAGGGTAGATATGAGGGCCTT
CAGCGTCAACAAAGAAATCTTCTTGGTGAGGATTTAGGACCTTTGAATTCAAAGGAATTAGAGCAGATTGAGCGTCAACTAGATGGCTCTCTCA
AGCAAGTCCGCTCCATCAAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAACAAAGAGCAAATGTTGCTTGAAACCAATAGAGCTTT
GGCTATGAAGCTGGATGATATGATTGGTGTGAGAAGTCATCATATGGGTGAAGGAGGATGGGAAGGTAACGAACATAATGCTTCCTACGTGCAT
CATCAAGCTCAGTCTCAAGGACTATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTATGACAATCCAGTATGCTCGGAGCAGATAA
CTGCAACAACACAAGCTCAGGCACAGCCAGGTTACATCCCAGACTGGATGCTCTGAAAGTCATGTGATCAATTCTAATGCTGTGATCAACCTCT
CCAGCAAAAAGACCCTGTTTTTTATATATAAATTTATTGACACAATTAAGACTTGGATTTGTAGACATAAGTGTGGCTAAATATGTAATGTCCT
GAGGATCTCCAGTACATTTGTGTATTTTGGGGTAACCTTGCTATATACTAAGGATTGCTATATGGATGGGGAACTTGATCACCTGAGAATGGAA
ATTATTCTTTGATCAACATGAATGAGAAAACAATGCAAATGTTCTTGAGTT |
Primers for UN04435 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAACCTCCACACACTTCCAA |
59.565 |
20 |
CACTCTTCCCCTTCCCATTT |
60.298 |
20 |
239 |
29 |
267 |
| 2 |
CAACCTCCACACACTTCCAA |
59.565 |
20 |
TCTTCAGCTCCACTCTTCCC |
59.53 |
20 |
249 |
29 |
277 |
| 3 |
CAACCTCCACACACTTCCAA |
59.565 |
20 |
CTCTTCCCCTTCCCATTTTT |
59.393 |
20 |
237 |
29 |
265 |
|
|
