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Simple sequence repeat (SSR)
>UN47404
GGATCGTTCCCCCCATTGCTAGAGAGATTAGATTCGAGAGAGAGAGAAGAAGAAGAAGATGAGTTTCCAAGATCTCGAAGCTGGCTCTCGATTT
CAATCGCCGAATCGTTTCACCGGCGGGAGGAGGCAGCAGAAACCTCTGTCGCGTGGAGATCCGTCTCAGGAGGTAGCCGCCGGGATTTTCAGGA
TCAGCACGGCCGTCAATTCCTTCTTCCGCCTCGTTAATTCGATCGGAACGCCTAAGGATACTCTCGATTTGCGAGATAAGCTGCAAAAGACAAG
GTTGCAGATATCAGAACTGGTGAAAAATACGTCAGCTAAGCTTAAAGAAGCTAGCGAAGCCGACCTCCATGGAGCAGCTACTCCAATTAAGAAG
ATTGCGGATGCTAAACTGGCGAAAGATTTCCAATCAGTTCTCAAAGAGTTTCAGAAAGCTCAGAGACTTGCAGCTGAAAGATAATTAACATATA
CTCCTGTCGTCACTAAAGATATGCCTACCAGTTATAATGCACAGGAACTGGATATTGAATCTTTGAGGACGTCCCAGGAGCAAACTCTTTTTCT
ACAATCAAAAAGGCAAGAAGTGGTGTTTCTAGATAACGAGATAACATTCAATGAAGCAATTATTGAGGAAAGAGAGCAAGGAATAAGAGAAATT
CAAGAGCAGATTGGTGAAGTGAATGAAATCTTCAAAGATCTAGCTGTCTTAGTGAACGATCAAGGAGTTATGATCGATGACATCAGCTCTAACA
TTGATAATTCACATGCTGCAACTGCACAAGCAACTTCCCAACTCCGAAAAGCATCTAAAACTCAAAGAGCAAACTCATCCTTGACATGCCTTCT
TATTCTCATATTTGGGATTGTTATACTCATTGTCATCATCGTTGTCCTGGTCTGAGCACCAAGCTCCAAGCATCAACCGAAGAAGAGTCGAGGA
AACTATACAAGTTACCACACTAAAGATATATATATTTATTGTACAGATTCTTTGTACTGCATCGTTCTTCTTCCCTTGCAATCGAATTGAATCT
TGACGTTTATGTATTAATCCATCTTAATGATCTTTATTGCGAAAGATACGAACATGTAACGGTTGATGTCTATTACTTCTTTTGCT |
Primers for UN47404 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCCCATTGCTAGAGAGATT |
58.214 |
20 |
TGCAACCTTGTCTTTTGCAG |
60.027 |
20 |
279 |
10 |
288 |
2 |
CCCCCATTGCTAGAGAGATT |
58.214 |
20 |
TTCCGATCGAATTAACGAGG |
60.031 |
20 |
227 |
10 |
236 |
3 |
CCCCCATTGCTAGAGAGATT |
58.214 |
20 |
CTCCTGAGACGGATCTCCAC |
59.792 |
20 |
157 |
10 |
166 |
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