 |
Simple sequence repeat (SSR)
>UN47409
AATCGAGAGGGGCGTGTCTCTTATACGATAATCTTGTGGTGGTCTGTGGTGTGACATCTTGAGCCAAACACACACGAGTATAGAGAGATTAGAG
AAGAAGAAGAAGAAGAAGACGACGACGACGCTTACCCAAAGCTCGAATCCCTAGGTTTTGGCTAAAAAAATATACAGTTATTGTTATCCCCAAG
GCAATCTATCCATTAGATATGAACTTAAGCAAGAAAGCAACGTCAAGTGATTCAAAGCTAAGTTCTACTCTCAAGCCAACAACTTTGAACCCTC
ATGCTGCTGAGTTTGTTCCCTTTACCCTACGCTCCCCCAGACCTACTACTACTACTACTACAAGCAACTTGGATGTTACCACACCAAGACTTTT
AGCTTCCTCCAGCTCTGTCCTGGACCGGTCGGAGTCATCTGTGTCACATCATTCAGATGATGAAGCACGCCAGTTCTGGAGTCACCAACTTCCT
GATGATTTAACTCCAGACTTCAAGCTGATGACCACTCAAGATGACAATTCCTATGCTTCTGGGAGTCTGTCACTAGCTAGCTTGTCCTTGTATG
AACCTGAAAACTTTCCTCGTGCTAGCGGAGGTGGAGGAGGAGGAGGAGGAGGGTTTGTGTTTTCTGACCAATCTGGATTAGCTCCACATAATGG
GCATAACCTGTCGGACAAGAGTAGATATCCCATCTCTTCTTCGTTCGGGGAAGATCAGAGTTTCAGTCCAAAGCCCTGGGATAAGCAGATTATG
AATGAGAGGGAGAGAAACCCTTTTGGCCGGTTCATGATTCCCGAGAATCCAAATGTAGGGGAAATGGAGGTGAACCCTGTGGAGTTTCTTGCTT
CTCAGTTCCCTGGATTTGCTGCTGAAAGTCTTGCAGAAGTTTATTTTGCTAATGGGTGTGATTTGCAGTTGACAGTTGAGATGCTTACTCAGCT
TGAGCTACAAGTGGATAATGGTTTGAATCAGAACATGAGGCCTAAGATTCCTGCTCCTGCTCCTAATCTAACTCCCATGGATTTTCCTGCCCTT
AGCATCTCAAATAGGCCTACTGCACAGTTTGGTGGGGATGATATGCAACAAACAGGAAATCATTACCAATCTGCTGGAAAGGATAATATGTTTT
TCTTCAAGTCAGTTCCTCAGCCTGGTTCAGTCGATTATGTTTCTGCCGTCAAGAAGTTAGCATCCCAAGACACTACTGGGTTGTGGAAATACGA
AGGAAACGATTCAGGAGACTCATCTATTGGCTCAAGCAGAAATTATCATCCTGGGAGGAGTATATATTCTGATAAGCTGCTCACTCAATCCCCA
AACCGACCTGCTCCTGTCGCCTGGCTGGAGACCGGGGACGCAGTTGGTAATATGTATTCTGACTTGCGCGAGGAAGCACGTGACCATGCGCGTC
TGCGGAATGTATACTTTGAACAGGCACGGCAAGCATACCTTGTGGGGAATAAGGCCTTAGCTAAAGATCTAAGCGCCAAGGGACAGATGCATAA
CATGCAGATGAAGGCTGCTCATGGGAAAGCTCAAGAAGCCATTTATCGTCAGAGGAACCCGGTGGGTCAAGGGAACAGTAGAGGGAGCGAAAGA
ATGATTGACTTGCACGGGTTACATGTTAGTGAAGCACTCGAGGTGTTGAAGCACGAACTGAGCGTGTTGAGGAGCACAGCTAGAGTAACACAAG
AGAGGCTTCAGGTTTACATATGCGTTGGGACTGGTCACCACACAAGGGGTTCCCGCACAATGGCCAGACTCCCAGTTTCTGTACAGCGCTACCT
ACTCGAAGAAGAAGGCCTTGACTTTTCCGAGCCTCAGTCTGGTCTCCTTAGAGTCATCATATACTGACCAGGTACCTCTTATATAGGAACCCAG
CGATACACAACCGGAAAGGAAAACCAAAAAAAGAAGAAAAAACGACCACGCTATTCATTTTGTTGTATCTGTTCTGTACATGGGAAGGCAAGAA
GAAGGAAGGCTTATATGCTAAAATGTTTTAGGTTTGTTAAGAAAATACTTTTTGTAGCATTAGAGGATCAACCAGACCTCTTTATCTGTTTTTT
TGTGGGGCTTTATGTGATGTTTTGTTGATTCTCTATGCTTTTACAGTTTTACTGTTATATACACTCCTTTCTTCAAGAAATGCTTATATTTGTA
GTCTCTAAAA |
Primers for UN47409 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCCCCAAGGCAATCTATCC |
60.117 |
20 |
CAGGACAGAGCTGGAGGAAG |
60.127 |
20 |
219 |
180 |
398 |
| 2 |
AACCCTCATGCTGCTGAGTT |
59.874 |
20 |
CAGGACAGAGCTGGAGGAAG |
60.127 |
20 |
123 |
276 |
398 |
| 3 |
TTGTTATCCCCAAGGCAATC |
59.762 |
20 |
CAGGACAGAGCTGGAGGAAG |
60.127 |
20 |
224 |
175 |
398 |
|
|
