 |
Simple sequence repeat (SSR)
>UN47409
AATCGAGAGGGGCGTGTCTCTTATACGATAATCTTGTGGTGGTCTGTGGTGTGACATCTTGAGCCAAACACACACGAGTATAGAGAGATTAGAG
AAGAAGAAGAAGAAGAAGACGACGACGACGCTTACCCAAAGCTCGAATCCCTAGGTTTTGGCTAAAAAAATATACAGTTATTGTTATCCCCAAG
GCAATCTATCCATTAGATATGAACTTAAGCAAGAAAGCAACGTCAAGTGATTCAAAGCTAAGTTCTACTCTCAAGCCAACAACTTTGAACCCTC
ATGCTGCTGAGTTTGTTCCCTTTACCCTACGCTCCCCCAGACCTACTACTACTACTACTACAAGCAACTTGGATGTTACCACACCAAGACTTTT
AGCTTCCTCCAGCTCTGTCCTGGACCGGTCGGAGTCATCTGTGTCACATCATTCAGATGATGAAGCACGCCAGTTCTGGAGTCACCAACTTCCT
GATGATTTAACTCCAGACTTCAAGCTGATGACCACTCAAGATGACAATTCCTATGCTTCTGGGAGTCTGTCACTAGCTAGCTTGTCCTTGTATG
AACCTGAAAACTTTCCTCGTGCTAGCGGAGGTGGAGGAGGAGGAGGAGGAGGGTTTGTGTTTTCTGACCAATCTGGATTAGCTCCACATAATGG
GCATAACCTGTCGGACAAGAGTAGATATCCCATCTCTTCTTCGTTCGGGGAAGATCAGAGTTTCAGTCCAAAGCCCTGGGATAAGCAGATTATG
AATGAGAGGGAGAGAAACCCTTTTGGCCGGTTCATGATTCCCGAGAATCCAAATGTAGGGGAAATGGAGGTGAACCCTGTGGAGTTTCTTGCTT
CTCAGTTCCCTGGATTTGCTGCTGAAAGTCTTGCAGAAGTTTATTTTGCTAATGGGTGTGATTTGCAGTTGACAGTTGAGATGCTTACTCAGCT
TGAGCTACAAGTGGATAATGGTTTGAATCAGAACATGAGGCCTAAGATTCCTGCTCCTGCTCCTAATCTAACTCCCATGGATTTTCCTGCCCTT
AGCATCTCAAATAGGCCTACTGCACAGTTTGGTGGGGATGATATGCAACAAACAGGAAATCATTACCAATCTGCTGGAAAGGATAATATGTTTT
TCTTCAAGTCAGTTCCTCAGCCTGGTTCAGTCGATTATGTTTCTGCCGTCAAGAAGTTAGCATCCCAAGACACTACTGGGTTGTGGAAATACGA
AGGAAACGATTCAGGAGACTCATCTATTGGCTCAAGCAGAAATTATCATCCTGGGAGGAGTATATATTCTGATAAGCTGCTCACTCAATCCCCA
AACCGACCTGCTCCTGTCGCCTGGCTGGAGACCGGGGACGCAGTTGGTAATATGTATTCTGACTTGCGCGAGGAAGCACGTGACCATGCGCGTC
TGCGGAATGTATACTTTGAACAGGCACGGCAAGCATACCTTGTGGGGAATAAGGCCTTAGCTAAAGATCTAAGCGCCAAGGGACAGATGCATAA
CATGCAGATGAAGGCTGCTCATGGGAAAGCTCAAGAAGCCATTTATCGTCAGAGGAACCCGGTGGGTCAAGGGAACAGTAGAGGGAGCGAAAGA
ATGATTGACTTGCACGGGTTACATGTTAGTGAAGCACTCGAGGTGTTGAAGCACGAACTGAGCGTGTTGAGGAGCACAGCTAGAGTAACACAAG
AGAGGCTTCAGGTTTACATATGCGTTGGGACTGGTCACCACACAAGGGGTTCCCGCACAATGGCCAGACTCCCAGTTTCTGTACAGCGCTACCT
ACTCGAAGAAGAAGGCCTTGACTTTTCCGAGCCTCAGTCTGGTCTCCTTAGAGTCATCATATACTGACCAGGTACCTCTTATATAGGAACCCAG
CGATACACAACCGGAAAGGAAAACCAAAAAAAGAAGAAAAAACGACCACGCTATTCATTTTGTTGTATCTGTTCTGTACATGGGAAGGCAAGAA
GAAGGAAGGCTTATATGCTAAAATGTTTTAGGTTTGTTAAGAAAATACTTTTTGTAGCATTAGAGGATCAACCAGACCTCTTTATCTGTTTTTT
TGTGGGGCTTTATGTGATGTTTTGTTGATTCTCTATGCTTTTACAGTTTTACTGTTATATACACTCCTTTCTTCAAGAAATGCTTATATTTGTA
GTCTCTAAAA |
Primers for UN47409 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTGAAAACTTTCCTCGTGC |
59.853 |
20 |
ATCTGCTTATCCCAGGGCTT |
60.06 |
20 |
182 |
567 |
748 |
| 2 |
CCTGAAAACTTTCCTCGTGC |
59.853 |
20 |
CACAGGGTTCACCTCCATTT |
59.82 |
20 |
267 |
567 |
833 |
| 3 |
CCTGAAAACTTTCCTCGTGC |
59.853 |
20 |
TGAAACTCTGATCTTCCCCG |
60.187 |
20 |
157 |
567 |
723 |
|
|
