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Simple sequence repeat (SSR)
>UN47435
ATATGTGAGCCAAAAAAATAAGTGAGAAGGAAACAAATGGGTTATAAGAAATGGATGAGTATTTGAACAGAAGATAAATTAACTCAAGAAGGCA
AAGATGAATCTTGTATTACTTTACATATATAAACTCAATGATTCATACCTGCAAAACTGATTTGCCCCACCTCTCTCTCATTTTTTCTTAAAAT
CTGAAGCTAAGAAGAAGAAGAAGCTCCAGGGTTTTAAGGGCAAATCATTTCACAAATAACTAATGATTGATGACCGGGGATGGAAGAGGTGATG
TTGGGGGCTTCATGTCCTCATACATTGTGTAAGGTGGCAATGGTCTTGGCTTTGGCGGATTAGCTGCACTTTCTTCTGGTGTAAGGGAAGTGTC
TGTCACATTGTTAACAGTTTCTGCTTCTGGCAAGGAAGCAGATTCAGTCGTTTTTACACTACCATCGACTGTTTCCACCACGTCATTGCCTCCA
GGCAACTCTGAGTTTTCTTCTGCAGGTGCTGTTTTCTTGGGACCAGTTGATGCAGGAGTTGGTGAGGTTGGTGGTTTCAGGTCTGCGTAAGCTG
CATAAGGAGAAAGAGGTCTCATTTTTGGTATAACTGGTGCTTCTGCCTCCTCAGTGACACTTATTTCAACTGTTGAGCTTTCAACAGTACCAGA
ATCGGTTGGAACAGGCGCCGCCACAGGGTCGCTCTTGCGGATACCTGAAGCTTTAGGAGTGGGTGATGAAGGGGGTTTTAGATTGTCATAGCTA
GCATAAGGAGAAAGAGGCCTCTCTTTCC |
Primers for UN47435 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCCCCACCTCTCTCTCATTT |
60.596 |
20 |
CCCCGGTCATCAATCATTAG |
60.148 |
20 |
110 |
158 |
267 |
2 |
ATTTGCCCCACCTCTCTCTC |
60.596 |
20 |
CCCCGGTCATCAATCATTAG |
60.148 |
20 |
114 |
154 |
267 |
3 |
GATTTGCCCCACCTCTCTCT |
60.596 |
20 |
CCCCGGTCATCAATCATTAG |
60.148 |
20 |
115 |
153 |
267 |
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