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Simple sequence repeat (SSR)
>UN47473
ATTACCAAACACAAACCATTATGTTTTACCCAAAATTAAGGAACAAAGCTTATTACTAGCTAGTCTCCACTGAACCAAAAATAACAAAAGCAAA
GCCAAAACTAACACTCGGATAGAGACGGATACACAAAGATACAGACTCCTGTAGTTCTGTCATCTGAACTCTCTCTCTCCGGGACACATAAATA
AACAGACAGTCATATATGATAATGAAGGGTACCGGTAGCACCCGAGTAGGACTAGGATGGGATGGGATGGAGATGGAGATGGAACCTTCAAAAG
CCTTCTTGTTTGAAGAAGGGAAGTGTGGTTAAGGTGAGATGAGTTTTGTTTTTATTTAGTCCCTTGTCTTGGCTCTCTTCATGCCGAGGCTATT
ATTGTAAGGAGAGACGGAACCAGACATTGGAGATGGAGACCCTTCTTCTCTAAGACTACCGTTGAGAAGCGCCAGTTCCCTTAGCTGTTGTTTC
TTGTAGAAATCATGCGTCTCCTCCACTGGAGTAAGTAGATCGGCTAGGATTTCACGAGCTTGCATGAGACGTGCATCCACTATCTCAATGGGCA
ACTCTGCCTCCACTAAGATGTGGAGCTGTTCATTCAGGTGCTCATACCCTGGTTTCCCTCTCATCATTTCCTCCTTGACTGGGTCTTTAATGCT
GCCTCTCCCCCTGATCAGAACACGGCATTCAGAGCTCGCTTCAACTCGTTTTAGGGAGTTTCCTCTAGGTCCCAAGAGGCGTCCAACAAAATTG
TAGTTTGGATACTTGTCGACTGGAATATCCACCCTGATTGATCGTTTTACAATGAGACCGGACGAGCTACCAGGAGAGTTTAGCCAATTTGGTG
CTGGAGATGATGAAAGAGATCTCTTGGTTCATGAGACGGAAGAGATGTGGGAGCACAGGCAAGAAGGGAGTAAGCTTGTGGCGCTCTGCGAGTA
ATTCAGAAAGATACTTTTCTTGCTCAACGAGGAAAGAAGGTTGTGATCGGAGACCACCAGAGAAGTTTGGTGACTGAGGAGCCGACGGAGGCAC
GGAAAGAGGCGGCGGATACGTCATAAATCTCCCTCCTCCACCACCATCCATACCGAGTGAAGTCATCATCATCATCAGGACGTCTTCTTATTCC
TCAGCTGCTTGTTACCGGGCTTTATAACAGTTAACAGCTATAGGAGGAGAGCTAGGAGGTGTTTGGTGGCGGCGGGATCAGAGGAGGATGAGAG
AGGAAGTGAATCTCGCACACACACGTCCC |
Primers for UN47473 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATCGGAGACCACCAGAGAA |
60.199 |
20 |
TGTGTGCGAGATTCACTTCC |
59.837 |
20 |
259 |
985 |
1243 |
2 |
TCGGAGACCACCAGAGAAGT |
59.835 |
20 |
TAAAGCCCGGTAACAAGCAG |
60.257 |
20 |
166 |
987 |
1152 |
3 |
GAGACGGAAGAGATGTGGGA |
60.199 |
20 |
TAAAGCCCGGTAACAAGCAG |
60.257 |
20 |
274 |
879 |
1152 |
|
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