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Simple sequence repeat (SSR)
>UN04477
GGATGAAAGAAGAGGGAGATGGTTTCGCTGTGTCGAATCTAAAGGTCTTCTCCTTCAAGGAGCTTCAGAAAGCTACCAATGGGTTCTCTGAGAA
GCTCGGACACGGCGGTTTCGGTGCTGTTTTCAAAGGTACGCTGCACGATACTTCCACCTCCGTGGCGGTGAATCGCTTGGAAAGACCGGGAAGC
GGGGAGGGAGAGTTCCGTGCGGAGGTGTGCACCATCGGGAACATTCAGCACGTTAACCTCGTTAGGCTTCGAGGTTTCTGTTCGGAGAATCTCC
ACAGGCTTCTCGTCTATGACTACATGCCGAACGGATCGCTGAGCTCCTACTTGTCGAGGACAAGTCCTGAGTTGCTAAGCTGGGAAACGCGTTT
CAGGATCGCCTTAGGGACTGCAAAAGGGATCGCGTATTTGCACGAAGGGTGTAGGGACTGTATCATTCACTGCGATATCAAACCGGAGAATATT
CTCTTAGACAGTGATTACAACGCCAAAGTGTCTGACTTCGGATTGGCTAAGCTTGTTGGCCGTGACTTCAGCAGGGTTCTTGCCACTATGAGAG
GTACATGGGGGATACGTTGCTCCCGAGTGGATATCGGGTTTACCCATCACGACTAAAGCTGATGTGTATAGCTTCGGAATGACACTGCTGGAGC
TTATCGGTGGTCGAAGAAATGTCGTTAGCGAGACACCTGGAGAGAAAGATGAGAAAGAACCCGAAAAATGGTTCTTTCCTCCGTGGGCTGCACG
TGAAATCATACAAGGAAACGTGGACTTGGTTGTGGACTCTAGACTCAACGGAGAGTACAACAATGAAGAGGCGACGAGGATGGCCACAGTGGCG
ATATGGTGCATACAAGACAATGAAGAGATAAGGCCGGCAATGGGAACGGTGGTGAAGATGCTTGAAGGAGTTGTGGAGGTGACGGTTCCTCCAC
CGCCTAAGTTGATACAAGCTCTTGTCTCTGGCGACTCGTATATTGGAGTGGGCAACGGTTTGAGCGGCACAAGCTGTAGTGAAGGCAGGGGTTG
TTCGGATCTCATGACTGGATTGTCTAGCCCCACCGGCTCACGGTCGTCTTTTGGTGGTAAACTTCCTCCTTCTCCCTGATCAGTTTGTAGATTG
TTTTGTTAGAAGCGGTCTTAAATGTGTGTGTGTGTTTTTTTTGCTCTCTAAGAGGGTTTAATTAGTAGTACTGATCTCTAGTTGTTGGTTGTAT
GACAATGAAGCTTTAATTTGTCATTTCCTG |
Primers for UN04477 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GACTGGATTGTCTAGCCCCA |
60.073 |
20 |
GCTTCATTGTCATACAACCAACA |
59.919 |
23 |
187 |
1047 |
1233 |
2 |
TGACTGGATTGTCTAGCCCC |
60.073 |
20 |
GCTTCATTGTCATACAACCAACA |
59.919 |
23 |
188 |
1046 |
1233 |
3 |
GCTCTTGTCTCTGGCGACTC |
60.292 |
20 |
GCTTCATTGTCATACAACCAACA |
59.919 |
23 |
276 |
958 |
1233 |
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