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Simple sequence repeat (SSR)
>UN47561
CCTAGGAAGAGTCCAATTTTTCTTCTTTGTCACAGACACAGTCTGGAAAGCATAACGGTTTTCAATACTTGAGTAGCCGATTAGAAAGCATAAC
GGTTTTCAATACTTGACTAGCCGATGGTGTATAATATCAAAAAAGGCAAGATCATGCTTTAAAGCTCTAGAGATGAAAGTTTTGGCTTTTTCTT
CTTATCGCCGTGTTACACAAGCTCGATACTTGGAACACAGCTTAAAAACGAGAACTACAAGATGTTGTAGCTTAAACCAAAAGCTCCACATTAC
ATGGGAACATCTGGATCCAATCTTTTCTGAATAGCATTTGCACCCTCCATGTCCCCAATCTTGTACAAGTAGACCATTTCTTCCTTAAGCCGAG
CTTGTTCCTTCATAGCTTGAGCCATTCCGCCTTCCATTGATCGCTTTAGAGCTAAAACTTCTTCTTCCTTCTGCTTTTCGCGTGCTTCCTGCAT
CTCTAGCCGGCGTTGCTCCTCGTCATTGAACACAGTCCGTTCACTCTGCCCAGCTTTCTTCAAACCCTTCTTCATCTCTTTCTCCAACTTACGT
CTATAGTAACCATCAATGTCATAGTACTTCTTGGAGGTAAATGTACCAGTATTGTGATCTTCCATGAAATCTTTAAACATTTTCTTCTCTTCCC
ATGGTGGCAAGCTTTCCAAGTTGACCTCTTTTACTTCAAGCAGCCATGCTGTGAACTCTGGTCGTTTATTCCACATATCAGTCTCTCTGATGAC
TCCATACTTGCCCCAAGATTCAGTAACAGCTCCTTTCTTGGCTTTCTCAGACTTCTTCTCCTTCTTCCGCTTCTTCTTCTTGCTGCTATCATCT
CCTTTCTCCTTCCTTCTCTTCTTCTTCTTCTTCTCTTTCTCTCTCCTCCTTCTCTTCTTATCTCTCTCCTCCCTCTCCCTTCTCTTCCTCTTCC
TTCTCCTTCGCTCATCCTCACCCTCGCTCTCCTCGGAATCCGAATACTCAGACGAATACTCCGACTCAGATTCCGATTCCGAGCTACTACTGGA
ATCATCGCGGCGTCTCCTGCTTCGTCTACTACTACTACTACGAGATCTCCGATCTGATTTCCTTTTCCCTCTCGACTTGCCACTTCTACGTCTC
TCTTCCTTCTCCGACTCGGACTCGCTACCACTCTCCAGTCCCGAACCAGAATCGGAGTCTCTGCCGTCTTTTGATTTTCTCTTTGATTCGCGGC
GACTCACATCTTCTTCGACCGGCTTCTTTTCGATACGGCTCGATTTCTCCCGGGATGATTCTCTTCTGTAGTCTTTATCCTCGACGTCGCATCT
CGCCTTCTCCGGCGGAGAGTCGTCGCGGTCTCTTCCCATCTCGCAAAATCGCCGGTGAGTTACCCCCTCGACTCAACCCTAGATCCC |
Primers for UN47561 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCAAGCTTTCCAAGTTGACC |
59.859 |
20 |
GAAGGGAGAGGGAGGAGAGA |
59.883 |
20 |
264 |
665 |
928 |
2 |
GCAAGCTTTCCAAGTTGACC |
59.859 |
20 |
GAGAAGGGAGAGGGAGGAGA |
59.883 |
20 |
266 |
665 |
930 |
3 |
ATGACTCCATACTTGCCCCA |
60.34 |
20 |
AGCGAAGGAGAAGGAAGAGG |
60.088 |
20 |
205 |
748 |
952 |
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