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Simple sequence repeat (SSR)
>UN47871
GTTTCGATTAGGGGATTAGGGTTTCTAATCTCTCTCTCTCAATTGGATTCTTGAACTCAGAGTCGTTCTTCATCTCCCTCCCCATCGACAACCA
TGACTGAGTATTGGGTAAGTCAAGGGAAGAAGTGGTGCGAGTTCTGTAAGATATGGACTCAGAACAACGCGACAAGTATCAGAAACCATGAGCT
TGGTAAACACCACCGTGAATGTGTCGAGAAGAAGCTCACTGATATGCGTGAGAAGAGCGCTGCTAAAGACAAAGAGCTCAAGAAAAACGAGAAA
CTCCTTCAACAGATCGAAGCTAAAGCAACTCGTAGCTATCAGAAAGACGTAGCAACTGCTCATGAAGTTGCCAAAGCGAACGGTGCACCCGAGG
ATGGTACACACGATTGGGTTCTTGACGCTGCTTCGGGCTATTATTACAACCAGATCAATGGTCTCCACTATGATTCAAAGTCTGGATTCTATTA
CAGTGACTCGATAGGACGCTGGGTAACACAAGACGAGGCTTACGCTGCGGTTAAAACTTCATCAGCTAAAGACACTAAAATGCCTCTCGTTAAA
AAGCCTGTGCCTTCCTCAGAAGCTGGACCAAGTACGGTCAAACCACCTGGGAGGGTTGTCTCGGCTACTTTAAACCCGAAAAGAAATGTGAAAG
GAGCTGCTTCATCTGTTGAGATTGGCAATAACAACAAGAGAAAGAGAATAGATGAGAAACCCAAGAAAGTATCTGCAGAAGAGAAAGCTGCGTT
GAGGGCGAGAGAAGCTGCTAGGAAACGAGTTGAAGACAGAGAAAAATCATTGCTTGGCCTTTACAACAGACCTTTTTGATGAGAAACCATTGCT
TGATCCTCTGTAACAGAGGACAGCAATGTTATAGTTATTTCGGTTATTCCTTTCAAACGTTCAATCCTAAAC |
Primers for UN47871 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTCGATTAGGGGATTAGGG |
58.011 |
20 |
TTGTCGCGTTGTTCTGAGTC |
60.032 |
20 |
168 |
2 |
169 |
| 2 |
TTCGATTAGGGGATTAGGGTTT |
60.038 |
22 |
TTGTCGCGTTGTTCTGAGTC |
60.032 |
20 |
167 |
3 |
169 |
| 3 |
TTTCGATTAGGGGATTAGGGTT |
60.038 |
22 |
TTGTCGCGTTGTTCTGAGTC |
60.032 |
20 |
168 |
2 |
169 |
|
|
