Simple sequence repeat (SSR)
>UN00030
GGACTAACCACAGGTCCACAATCGTCGCATAAGAAAGGTGAATCGAGAAAAGCGAAAGAAGAAGAAGAAGAGGAAGATGGGAGGAGGAATGGAG
ACGAACAAGAACAAGTTCATCGAGGATTGGGGATCGGCTAGGGAGAATCTGGAGCACAACTTCCGATGGACACGTCGCAACTTCGCTCTCATCG
GAATCTTCGGCATCGCCCTCCCCATCATCGTCTACAAGGGCATCGTCAAAGATTTCCATATGCAAGACGAAGATGCAGGCAGACCACACAGGAA
GTTCCTATGAGCTTGTTTGCGACAACACTCTCTTCTGCAAAATGTCTCAGCTGTGTGAAGTTTTCAAGAAGCTGATGCTATCACTCTCCTTTCT
TTCTTTTTTTTTTTGCATTTTTATTCATAATAAAAGAACAACATCTGAAGGATTATAATTGCTGTTTCGAAAAGTTTGTTTTGATTGGCAAATA
AAAAAA |
Primers for UN00030 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCACAATCGTCGCATAAGA |
60.22 |
20 |
AATCTTTGACGATGCCCTTG |
60.074 |
20 |
228 |
15 |
242 |
| 2 |
TCCACAATCGTCGCATAAGA |
60.22 |
20 |
AACTTCCTGTGTGGTCTGCC |
60.159 |
20 |
271 |
15 |
285 |
| 3 |
CCACAATCGTCGCATAAGAA |
59.688 |
20 |
AATCTTTGACGATGCCCTTG |
60.074 |
20 |
227 |
16 |
242 |
|
|
