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Simple sequence repeat (SSR)
>UN47944
GGTAAATGAGCACTGGACCTGGTAGTTCTAGAGTTTTGGTTTTGCAACCGTAACAAAAACTAAGTTTCAGTTGTTTATCAAGCTAAAGCTCTCT
AATAGAAATGCTCATTCATCTTCAAGTTTCACCAAGTCCCTTTAACAAAGGAAAATTTTGAAGAGAAGGCCATGTCCAGCCATTGTTCAACACT
ATAGAAGAAAAAAAAAACTGATCCGGAAATGTCTTCTAACTTAGGACTATAAATAGTCAGAGCTTAGGATTGTGTCTTTTCTTCTTCTTCTTCT
TGTTCTCCGTTACCTTCATCTTCAGCTTCCACACCTAAGGATTGGTCTAAGTACTCCTGAGCGTCTTCTAGTGCAGATTCATTTGCATCTGTTG
CATACAGTATCTTCTTCACTGCTACCACTATCGGAAGATCCTCTACTTCAGGAGTTTGGCAAAGTAACTCTACATCCCGGAGCTTGGTGAAGTA
AAAGTCTCTTTCTCTTTCCAAGAGGTCAAAAGAGATCTTGAGATCTGCAAGCTCCTTCGACAAAACCTGCACTTGAGCTGATTTTGCTAGCTTG
GGCTGCCCTGGATTGGGTGGAGGATGATGATTATTGTTGGGCATCTTATTAGATCCCTTTACACTCCTCTCTTTACCACCTTTTGATCTTCTTT
CCACTGGATTATAGTTCTCATTCATAATGCCACCATTAATGGAATCACAGAAACGTTTCAGCCACTGTAGAAACTCCAAGTTATCCAGGGGTCG
GCCTTTGACTAGCCTGTTAATTTCCAATGGCTTTGTAATTTTCAGCTTATTGAACACATCTTGCAGGACCTTGTAGTTTTGTACCATATCATAT
TCGTTCTTTGCATCAAAATTAACCTTGTGCATTGGCACAACTCCAGGAAAGGTCACATCAAGCATCTGACACTGAACAGCACCAGATGCAGCCT
CTTCCACGCGAGAGAGACTGAGATGAAGGCGGTCGTTGATCCAAGTCAGAATCTCGTTTCTTCCGACAAAGTAAGCACTGTCCATGATTCCGAT
GTTCGTCGCCATTTTGCTTCTTAACCCCCAAAAAGAAATAAGAAGAAGAAGAACGAAGAAAAACCCTTTTCTTTTCTTTTCTTTTTTTCCTTCC
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Primers for UN47944 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAGAGAAGGCCATGTCCAG |
59.803 |
20 |
TGCACTAGAAGACGCTCAGG |
59.339 |
20 |
204 |
154 |
357 |
| 2 |
GAAGAGAAGGCCATGTCCAG |
59.803 |
20 |
TCCTTAGGTGTGGAAGCTGAA |
59.861 |
21 |
170 |
154 |
323 |
| 3 |
TTGGTTTTGCAACCGTAACA |
60.007 |
20 |
TGTGGAAGCTGAAGATGAAGG |
60.382 |
21 |
280 |
36 |
315 |
|
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