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Simple sequence repeat (SSR)
>UN48044
GGACGAACGGAGGCAAAAGCCGATTCCACGTTTCCATCGTCTCTGAATCTGTTAATAATCTCTCTCTCTCTCTCGTTCAGGGGAAAACTTTCGT
AAAGATTTGGTAGAATCGTGATGGGTTTATCAAAAGGTAGATTGAAAGCCTGGTTCAATAAGAAAATCACCGATCCTCTCCTCCAGATCTTGCG
GAGAGGTACTGAGCCTAAGCAGCTTGCTTTCTCCGCTGCACTCGGTATTACCTTGGGGATATTTCCGATATGCGGTGTTCCTGTGTTTCTATGT
GGAGTAGCTATTGCGTTTCTTGGATCTGCTTGTCATGCTCCTACTGTGATGTTGGCTAACATCATTGCCACTCCAGCTGAACTTGCTCTCGTGG
TGCCTTTCCTAAGACTTGGTGAGAAAGTCACCGGTGGACCTCATTTTCCTTTGACATCAGATGCCCTCAAGAAGGTTTTCACTGGTCAAGCCTC
CCAGGAAGTCTTTTTAAGCATTGGTAATGCGTTACTAGGGTGGCTTGTAGCAACTCCATTCTTCTTTATTGCGCTGTACGTTGTGTTGCTTCCG
TGTTTCAAGATCCTTGTTCGCAAGTTTGGCGCAGCTGCTTCAACCCCAAAAATACCAATAAGTATGGAGACAGAGCTCAACCCGAAGCCAAGAG
TCGCTTATGT |
Primers for UN48044 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACGTTTCCATCGTCTCTGA |
59.831 |
20 |
ATCTGGAGGAGAGGATCGGT |
60.035 |
20 |
156 |
27 |
182 |
2 |
CACGTTTCCATCGTCTCTGA |
59.831 |
20 |
GCAAGCTGCTTAGGCTCAGT |
59.927 |
20 |
189 |
27 |
215 |
3 |
CACGTTTCCATCGTCTCTGA |
59.831 |
20 |
GCTCAGTACCTCTCCGCAAG |
60.156 |
20 |
176 |
27 |
202 |
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