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Simple sequence repeat (SSR)
>UN48052
GGGAGAAAAAAAATATTAGGTCTGATGGAGACAATGGAGCAACAAAGACATTCACTCTCTTCTTTGCCTATGCTCTCTAGGCTTGAGCATTTGG
ATTTTGTTATAAAGAATTTAGAAAGACAACAAGACGTTCCGAAATGGAAAGATGAAAGCACATCTACTACACGCGGATTAATCAGTAGAGGCAC
GGCGGTTAAAGAAGCTTATTTCAAAGGATCACTACTAGATAGAATTGCAGCTTTGGAGACCAGACTTTTTCAGATATGTTTGGAGTTGGAATCG
AGCAGTGCATCTTCTACTTCAACTGGAGGGTCCGGTGAAACATCAAGTCAAAGGATTAAGAGAGATTTGACAAAGACATTACCCATTTTCAGTA
GCAACATTAATCCTTTTCATATTCCCTTACAGCATTCACTAGACCCTCAGGAAACAAAAGAGAAGATTGAAGAGGAAGAGGAGGAGGAGGAGGA
AGAGGAAGAAGAGAAAGTGATAAATATTGAGAAACCACTGCTGGGGATGAAGAAGGATGCTAATAAAACTTGCAAACCAAACAGGAAGAAGAAA
AAATATTCCAAGAAATGGTCCTGGTTTAACTTATTGGGTTGCTAAATTTCTTTTATTGTTTGGACTATGCAATATTTCATATTTCGTTTAAATC
TAAGTTTTCCTTCTAAAAATATGTGATATGCTATCCGTCAAAGTTAGGACTAATTAATTAAAATGTTTGCTTAC |
Primers for UN48052 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCGGTGAAACATCAAGTCA |
60.088 |
20 |
CCCAGCAGTGGTTTCTCAAT |
60.111 |
20 |
203 |
313 |
515 |
| 2 |
TACTTCAACTGGAGGGTCCG |
60.103 |
20 |
CCCAGCAGTGGTTTCTCAAT |
60.111 |
20 |
219 |
297 |
515 |
| 3 |
GGTCCGGTGAAACATCAAGT |
59.827 |
20 |
CCCAGCAGTGGTTTCTCAAT |
60.111 |
20 |
205 |
311 |
515 |
|
|
