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Simple sequence repeat (SSR)
>UN48054
AGTTCAATGCATAAGCTCCTCTGTTACCACATCATAGATCCGTGTAATGACTTTTTCATGTTTTCTTTACAAGACCCCAAACCTATACAATGTT
ATCAGTGATAAGAGCTACGCAGCGAAAAAGAAACTGGGGGTCAATGAACCTAGTTTCAAGGGTCCATCTGCTGTTTCAGTTACATACAAGTGGG
GCTTTCACACACGATGGAGCAGAAGAGGTGAGCTCTTGCTGCACCTTAGGCTACTTGGCTGTCAAGGTGACTAAGTAGCCAACAACTGCTGTAG
CAGTTCCAAGGATCCCACCCACAATGACCTGTGGAGGGGTATGACCTAGAAGTTCACGCAAGGGTCTGCTTTCAGCAAGGGGATGCTCTGAAGG
AAGTTCATACACAATCTGATTGAGAAGCTCAGCTTGGCGTCCAGCATGTAATCTTACACCAGTTGCATCATACATAACAATGGAAGTGAGAATG
AAAGCAATGGCGAAAAGAGATCCACTAAAGCCTTCTTGTAAACCAACGGCCATAGCAAGAGCCGTAACAGTTGCTGAATGCGAAGAAGGCATTC
CTCCAGACCCAACAAGCCGTTTCAGATCCCATCTCTTTTCTTTATACCAGGTGGTGAAGAACTTGATGAATTGTGCGATGGTGAAAGCTAAGAC
GGAGGAAAGCAGAGGGTAGTTCGTGAATATTGAGAAATAGTGGGAAGAAGAGGAAGAGGATTCCTCCATTAGACGATGATCGATGGATCTCATC
AGGTAGAGCTTCAAATCAATCACGAGAGAGCTCTGCTAGAGGAAGAAGGTGACTTGAAGTTGAATCCATACGAGGAACCCTTTGCGTGTGGATA
AATCTTTCTTTTTGATCTCTCTCTCTCTCTCTCTCTCTTTAATCGGGTCTACCGTTCAAATCATCTTTTCTTTGGTTGTTTTCTCCC |
Primers for UN48054 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATGAATTGTGCGATGGTGAA |
59.931 |
20 |
GATTTGAACGGTAGACCCGA |
59.933 |
20 |
279 |
630 |
908 |
2 |
TGTGCGATGGTGAAAGCTAA |
60.401 |
20 |
GATTTGAACGGTAGACCCGA |
59.933 |
20 |
273 |
636 |
908 |
3 |
TTGTGCGATGGTGAAAGCTA |
60.401 |
20 |
GATTTGAACGGTAGACCCGA |
59.933 |
20 |
274 |
635 |
908 |
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