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Simple sequence repeat (SSR)
>UN48136
AGGGGAGAAAACGATCAGACAACATTGTCGCTTCTTATCTCTGAAAAAGAAAAACATGACACAGAGAGAGTCTGAAGATCAAAGCAAAAGCCTT
TCGTAGTCGTAATCGAAACGCCAAATCATTACCGTTCAACTGAAAATCCAACAGCTCTCTCTCTGTCTCTCCTCTCTCATTACAATGGAGAACG
GTGCTGGATTTGCAGGAGACAATATGAAAAAGAAGGAGCCTGTTGGTGATGGTTTTGTCGGCGGGTTTTTCGCTGTCTCTACCACCAAGATCGC
GTGGAAATCAAGGAAAAGATCAGCATCTGCGAACTCAGACAAAGCACTGGAGGCTGCTGCTATGGAGGTCACACCAGAGAAGGATGAGTCAACA
ACAACAACAACAAAAATGGAAACCACAACTCCACCTGTTCTGTCCGAGAAAAGAAAAGCTCTGTTTGAGCCACTTGAACCTATTACTACAAACT
TGAACGGAAAGCGACCAATGGACGCTGATTCGCTCTTGCCGCCCCCAGATTTCGAGTCTGCAAACTACCCGAAAGGTTGGTTGATCGGTAAGAA
GAGGAAGCTGGTGAATGTTGATGTGGTTGAGAGCATGCGTAGAATCGCAGTTCAAGAAATGAACAGAAAGGATCGAGAGATAGATGGGTTAAAC
GAGCAGCTAGAAGAAGACTCGCGTTGCTTAGAGCATCTGCAGCTTCAGCTGCTACAAGAGAGAAGCAAGAGAACAGAGATTGAAAGAGAGAACG
CAATGTTGAAAGAGCAAGTCGATATGCTTGTCAACATGATACACCAAGATGATGAAGATGAAGTACCAGA |
Primers for UN48136 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGCTGCTATGGAGGTCACA |
60.008 |
20 |
CCACATCAACATTCACCAGC |
59.967 |
20 |
255 |
336 |
590 |
2 |
CTGCTGCTATGGAGGTCACA |
60.008 |
20 |
TCAACCAACCTTTCGGGTAG |
59.964 |
20 |
219 |
336 |
554 |
3 |
CTGCTGCTATGGAGGTCACA |
60.008 |
20 |
CGATTCTACGCATGCTCTCA |
60.119 |
20 |
276 |
336 |
611 |
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