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Simple sequence repeat (SSR)
>UN48184
AGCATTAAATTCAAACGCATAAGCTTTTTATATTAAACATAAGACAATTGTTGGTTGGGTTGAGTATTAGTACAAGAGACAAACATAAAACCCC
TGACAGAATAAAAAGGCTTAGCAACAAATAACACTCTTGCTCAAATCACTTCATGTATCTGTGTAAGAACTTTCTGTGGAAGTCATTCCTGATT
GTATCATTGATGAAGCGCTTTGGTGCTTTCATTTCTCCACGTGCCTGATTCTTGAATACCACATCATCATCCCACCTTCTTTTGACACTAAACG
AAGTTGGAGTGGTGTTAAGCAGTGGGTTTCCTTTGAGAAGCTCCTCTTCTTTGGCGTTTAGCTCTTCCATCTGCTGCTGCTTTTCCTTCGTGAG
CCTCTCCTCCACTCTTTCTTTCTTTATCTGGTCGAGTTCAGCCATAAGAGCTTCAGTGTCATCCTCATCATCATCACTTTCGTCATCACTATCA
TCATCATCATCACTTTTGATATCAACATCAGAATCATCAGCGTCCACACTGCGAGGAACAATCCGATCTTCAGGGTCCATTTTAGAGCCTTCCA
GTAATAGCTGATTCCCTCTCCTGCGGTATCTATCATCAGTGTAGGATTTGTCTTTGGAAGCTAAGTGTCTCCTCTCACGCCCTTCAAGCTCGTC
ACGAAGATTCTTCTTCTGCACTTCCTCTTGAGTGTGTTGCCCTTCCCTCCTAGGCTTTAGAGTTGC |
Primers for UN48184 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCACATCATCATCCCACCT |
60.056 |
20 |
GTGGACGCTGATGATTCTGA |
59.794 |
20 |
272 |
246 |
517 |
2 |
TTGGCGTTTAGCTCTTCCAT |
59.845 |
20 |
GTGGACGCTGATGATTCTGA |
59.794 |
20 |
185 |
333 |
517 |
3 |
TTGGCGTTTAGCTCTTCCAT |
59.845 |
20 |
TAGATACCGCAGGAGAGGGA |
59.79 |
20 |
264 |
333 |
596 |
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