 |
Simple sequence repeat (SSR)
>UN04552
AAGGGCTATAAATAGCATTCATAGGGTCGAAAGAGGAGAATACAGAGTATACATATATTTTCTACAGATACAGAGTGATTTACAGACAACGTTT
GTCTTGTCTTGTTGTCTGATTCACTACAAGAAGAGAATGAACTGAGTGTTGTTGTTGTTGTGTCTCATTTGAACTCCAGCACTTGTGGGTTTGG
ATGAGCGTGAGACATATCTGATGGAGAAGACACTGAAGTGACGTTAATAGGGTACACCTCGGTTACTTCTTCAGTCTTCTCATCAACGTAGACC
ACATCCTGCATCGTGAGCTGGTGGTATTCGACCACTCCTCTAAGATAGAGGTTTTCCCGTGTGTATATCGAGTTCTCGTGAGCTAACCGAGCCT
TCTCAGCCAATAAAGTCTCAAGTTGAAGTCGCACAAGATCATCGTTATCAGTTTGGCTGTTTTCGCCGCTATGATCCTCCCTCAGAACCTTGTT
CTCCTCTTCAAGCTGAGCGCACCGCTGCTTTGCAAAGGCAAGATCAGACTTGACCATCTTCAGCTCCCGAAGAAGAAGCTTTGCCTTGGCAGCC
ATGGCCATTGCAACGTCGCGAGAAGCCTTGAGTTGGATCTCCAAATCAGCTTGTTGTATCTCAGGATTGTGCTGGCTCCGTGAAAGACTAGGCT
TCTTCTTAATCTTCTTACGTGTTTCCTGAATGATCCCTGCAGTACGTGTCTCCACAGCAGTAATACCCTCCTCAACTGCAGAACCAATGTAATT
CAAGGAGGAAGTGATGGCATCTAAGCTTCTTTGCAACGAAGGATTCTCTGTTTTCCTACCAGCTTCCTTAGTTCCTGAAGTAGTGGAAGAAGGG
GTGCTGTTGTGGTCCATCCTCGTGGGACTTGAGGTAAGTGTTGAGGAGGATCCTCATCATCTAAAAGAGCCTTAGCTTTACTAGCGAGACTACC
CCAAAAGCTTCGTTTAGGCTCGTTGTTCAAACTCTTCATCGACGTGTACTCATGAGCCTTCTTATTCTTCACCACCACCTCCTTTGGTGGAGTG
GGAACAGGAGGAGAAGAAGAGTAGGCAGAGGAAAGAGAGGAGTCTCTGTGCGCTGAAGATGCTCTAATCGCCTTCGCTGCTAGCGACGACGCAG
CAGAAGCAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGACATCCTCGCGAAATTTAGATCAAATCTGAAACCTTGGATCGATCCTCGATT
TCGTTTTTCAACTTCTCTCTCTCACGATCATCGATTGGAATCAAAAGAGTCTTCGATTTTTTTTGGGGGGTCGGGTCGGATCTAGGGTAGGGCT
TTCCTGTGAGAATCAAATTTGGGATCTATCTCCCCATCACG |
Primers for UN04552 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGAGGAGTCTCTGTGCGCT |
59.89 |
20 |
AAGCCCTACCCTAGATCCGA |
60.053 |
20 |
249 |
1069 |
1317 |
| 2 |
GAGAGGAGTCTCTGTGCGCT |
59.89 |
20 |
TGATTCTCACAGGAAAGCCC |
60.195 |
20 |
263 |
1069 |
1331 |
| 3 |
GTCTCTGTGCGCTGAAGATG |
59.733 |
20 |
AAGCCCTACCCTAGATCCGA |
60.053 |
20 |
242 |
1076 |
1317 |
|
|
