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Simple sequence repeat (SSR)
>UN48311
CTGATGAAAAATTCAATTTTCAACAATAACATTATTGATCTGTTTCAGCAAATTATATCGGCAACAAATATGCAATTGCCTCAACCACATAGAA
ATGGACTAGAACCATAGGAAAAAAATCTCTCAACAAATAGCTCTTTTTTCTTGTTTAAAACCAACCCCTTTTAGCCTAATCAGCTAATGCCTTT
ACAGCTTTCTCTGCTGCGTCATCCAAATCATCAGCTGTTATGAGTTTCATTCCACTCTCCTTGAGGATTCTCTTTCCTTGTTCAACATTTGTTC
CTTCCAGACGAACCACCACTGGTACTTTCAGTGACACCTCTTTAGCAGCATTCACAATTCCACTAGCAATCACATCACATTTCATTATCCCACC
GAATATGTTCACCAATATTGCTTTCACTTTATCGTCCGATGTCAGTATCTTAAACGCCTCCACCACCTGGTGTTCAGAAGCGTTTCCACCAACG
TCAAGGAAATTTGCGGGTGTCCCACCGTGGAGTTTAATGATGTCCATGGTTGCCATGGCCAATCCCGCACCATTCACCATGCACCCAATCTCTC
CATCTAAACCGATATAGTTCAGGTCTACTTTTGCTGCAGCCACCTCTCGTGGATCCTCCTGTGTTGGATCACGAAGGGCAAAAATCTCTTTCTG
ACGGAAAGCAGCATTATCATCAAAGTTCAACTTAGCATCAGCAGCTACCAATTGGTTCGTGGATGTCTCAGCGAGAGGGTTGATTTCCCAACAT
AGTGCAGTCACTCTTGCGAAAGAGTTCGTAAAGCTTCTTCACTTGTTCAATCGAATCTTTTCTGTCAGCAGCTTTTGGAGCCAGACCATCCACA
ACCTTGGCAGCATCTTCATCTGTAATTCCTGCAAATACATCGATCGGTACCTTTATAATCATGTCAGGGAACTTCTCAGCAAGATCTTCAATGC
TAGTACCACCCTTCTTACAGGCAATTATAAGCGGTCCAGCAGATTTACGGTCGAGAATAATGGAAAAGTACATCTCATTGACGAGTGACAACTT
CTCACACAAGTAAACCTAGCTGACTACTTTGCCTTGAGGACCAGTTTGTTTGGTGACGAGTACTTGTCCAAGCATCTTTCCAGCAATGTCTTGA
ACCTGATCACGTTTGACAATGTGAACACCACCTTGAAGACCACTCTTGAAAGTCCCGAGACCTCTTCCACCAGCCAAGATCTGGCTCTTAACGA
CCAACTCGGTTTCATTAGGGAAAACTTGTTCGATAGCGTTTTTAACTTCATCGAGAGAAGAGACAGCGACTCCGTTGGGCACATTCACTCCGTA
TTTACCCATCAGCTCTGCTCCCTGGTACTCGTGGATGTTGAGACGGCGAAGCTGTTGGTGTTGCCATTTGCCGGAGACGGAGAGAGATCTGGAT
ACGAGCTTCTTCACCAATCCCCTCATACTTTCGATTTTTGTCTTACGGTAAAAAAAAATGAAAATCGATCAGAGAAATATAGAGAGAGAGAGGA
GGAAGAGAAGAGTCGCAGGGAGTCTAGGGTTTTTAATTTTCTCAAATGATCGATCTTTCTCCCTTAAGAAATGAGAGTTCC |
Primers for UN48311 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCAGCTCTGCTCCCTGGTA |
59.973 |
20 |
ACCCTAGACTCCCTGCGACT |
60.274 |
20 |
211 |
1324 |
1534 |
| 2 |
CTTCTTCACCAATCCCCTCA |
60.042 |
20 |
ACCCTAGACTCCCTGCGACT |
60.274 |
20 |
119 |
1416 |
1534 |
| 3 |
AGCTTCTTCACCAATCCCCT |
60.074 |
20 |
ACCCTAGACTCCCTGCGACT |
60.274 |
20 |
121 |
1414 |
1534 |
|
|
