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Simple sequence repeat (SSR)
>UN48405
CGATGATGAAAGTCTCATTTTATTTGTTCAACAAATTTTACACCACAATATATAGTAAAGAACACAAAGTTTTCTCCCACTTACACTTTTGTTT
ATTTGTTTTTTTTTTCCTAACCAAGATCGAGGGCATAATTGTAGTAGGCTACACATACATTAGTACAAAAGGTAAACACGTTCTTAGTCTTGCT
TGCGAGAATTGGCCTTCGCTTTATTCTGTTTAGCACAATATTCAAATAAACTTCCATCAAAGCAACCTCTCACAGCTTCTTTAGACACGAACCC
TTCATCATCCTTTGCAAGAAGATAAAGTAGTAGCCATTCAACTTTGTTCGAAACCCACCCAAAAGGATCGATTGCCATTCGGTTTCCCTCGGTT
AAGTTCCAAAGCTCTTTAAATGATAACTTATCCGAAACTGTTAAAGCGTATTTGCTAAATATGTTCTCGAGATTAGCCGGTACAAACCTTCCTT
CGGTATCATAGGTGCTTGAATCACTCCCATGCTTAGCTTTGTGTATGTTGTCGATATAAACAGGTAATAGTGGTGATGGCAACCAACTCGGAAG
TGTAACATAGCTAAACGCTAAGTTTACGATTAAGCTCCAAAATATACAGGCGATTGGGTTGAAACCAAGGTCACGGAGTCCTGCATAAGTCTCC
CAAGGATAGACGATTCCGTCGCCGTTTTGGTCGAAGAAAGCAACATGTTGTTGCATAACACTCATGCCTTTGCTGTCATGACCTTCTGTTCCAT
TCGGATGCTCTGTATCTGGAGCTGCTAATGCTCTAGCCAAATATGGTTTAGGTAATGTGTCCTCCAAATCGTTCCGTACTTTTCGCTGACCGGT
CACCGGAGCTAAAGGCGCCGTCGTGGCAAAAGCCTCTGACTCTTCTCCCATACTCTCTCTCTCTCTCTTCGGTAAGTGTTAATAATTGAAGATG
CTCTCAGTTCCTTCTTTTTGCAAAAGATGTAACAGTGTCC |
Primers for UN48405 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GACCTTCTGTTCCATTCGGA |
60.05 |
20 |
GCAAAAAGAAGGAACTGAGAGC |
59.658 |
22 |
224 |
738 |
961 |
2 |
GTCCTCCAAATCGTTCCGTA |
59.933 |
20 |
GCAAAAAGAAGGAACTGAGAGC |
59.658 |
22 |
151 |
811 |
961 |
3 |
GTTCCATTCGGATGCTCTGT |
60.081 |
20 |
GCAAAAAGAAGGAACTGAGAGC |
59.658 |
22 |
216 |
746 |
961 |
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