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Simple sequence repeat (SSR)
>UN48562
TCGAAAAATTTCGGAAAATTCTCGACTCGTCTCCGCAAGAAGAAGATGACGGGAGTTGATGATGGTAAGGAGTTCAAGGATGAAACCGTGATTC
TCAGCGACGACGATAGTGAAGTGGAAGAAGTTAAAGACGGAGGAGAAGAAGGTTCCGACGAGGAACCAGAAGTCGATGGAAGTGAAGGTGACGA
CGATGATGATGATGATGATGATGATGATGAGGAAGATGACGACGACGAGGTCCAGGTTTTGCAGTCCTTAGGTGGGCCTCCGGTACAGTCGGCT
GAAGATGAAGATGAGGAAGGAGAGGAAGACGGAAACGGAGACGACGGCGACGACGATGACGATGATGATGATGACGACGTCGACGATGATGACG
AGGACGATGACGGTGAAGATGAGGAGGATCTTGGGACAGAATACCTAGTCAGGCCAGTTGGTCGGGCTGAAGACGAAGAGGACGCAAGTGATTT
TGAGCCGGAAGAGAACGGTGTTGAGGAAGACCTTGACGATGGTGAAGACGACGAGAATGATGACTCGGGTGTTGCTGGAAAATCTGAGGCTCCT
CCCAAAAGGAAGAGAGGAGCTGCTGATGAAGAGGAAGAGGAGGATAGTGATGATGGAGATGATGCAAGACCTCCAAAGAGGTAGTTTTCAAGGA
ATTATAACAACAGCACGGTTCAAACAAACTGAAAGAGAGCTTTATGTTTTTTTTTCCTTTTTAAGTTTGGAGTCGTGAGATTTGAATCATTGGT
TGGGGTTCATGTAAGTTTATTATGGATCAAGAAGTAGGGCTTTTTATTTTTCATTTTATGCAGATGTTTTCTCTTTTCTAGTGAGTAACCAATG
TTTCTTGAACGATTTACTGTCTAATGCTTTTTCTTTATTAGAGTT |
Primers for UN48562 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGAACCAGAAGTCGATGGAA |
60.05 |
20 |
CCCACCTAAGGACTGCAAAA |
60.103 |
20 |
109 |
156 |
264 |
2 |
ACTCGTCTCCGCAAGAAGAA |
60.134 |
20 |
CCCACCTAAGGACTGCAAAA |
60.103 |
20 |
240 |
25 |
264 |
3 |
GGAACCAGAAGTCGATGGAA |
60.05 |
20 |
CTGTCCCAAGATCCTCCTCA |
60.191 |
20 |
260 |
156 |
415 |
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