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Simple sequence repeat (SSR)
>UN48645
GAATTCTAAATCAGGAAACCCAATGTTCATGGATCCGAGCAATCCGACATGGGGTTGGAGCTGGTTAGAGAGATGGATGGCTGGTCGTCCATTG
GAAGAACCAAACAATGACAATATTGCCGCTTCACTCAAGAACCGTAACGAAGCCACAAAAGCTATAAACCGCAATAAAAACTCAACACAACTAA
ACACACCATCATCCGCAAGAGGTGGTGGTGGTGGTACTCCAAGAAACAAAAACTGTTTCTTCTCTCCTCCAACTCCCTCAAGACTAAACCAATC
CTCCAACGACGACGCCAAAAGCACCGTCTCGGTTCTGTCCGAGAGGAACCGTAGACACGGCATCGGTGGTGGTGGTTCATCAGTCAGAGATGAC
GAGAGTCTGGCTGGCTCACAGTCTCTACCGAGCTATATGGTTCCAACTAAATCAGCTATAGCCAGGCTGAAGCCGCAGCAGAGTCCGTTAAGTG
GTAGTACCACACAGGAGAACGATGGGCTTGTTGCAGACAAGGCATCTGCTAAGAAACGCCTCTCTTATACGAGTTCATCTGCATTGCCCAAACC
ACGGAGGTTCTCAGCTCCGCCTAAAGTGGAGAGTGGCGACGTTGCCGTCACCAATGGAGGAGTAAGCTGAGGTTTGGTTTGTCTTTTAAACAAA
AAGATATATGTGATTTTCCACTTTGATGGATATGTCCGAGATGGTTTGTTGTATGTTTGCTATGTGTTCCCCTTTCATTTCATAATTCATTTGT
GCAGAGTGTGTAAAAGCGCCTGTTATTTTATTTTTTTACTATAAAAGAATTTTAATTATTCAACGA |
Primers for UN48645 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAATATTGCCGCTTCACTCA |
59.833 |
20 |
TGAGGGAGTTGGAGGAGAGA |
59.913 |
20 |
157 |
112 |
268 |
2 |
TCAAGAACCGTAACGAAGCC |
60.249 |
20 |
TGAGGGAGTTGGAGGAGAGA |
59.913 |
20 |
140 |
129 |
268 |
3 |
TGACAATATTGCCGCTTCAC |
59.694 |
20 |
TGAGGGAGTTGGAGGAGAGA |
59.913 |
20 |
160 |
109 |
268 |
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