Simple sequence repeat (SSR)
>UN48767
GGGAGTCTTGATTCACCGAAACTCAGAGAGAGAGAGAGAGAGAGAAGAGAAGAGTTAGAAGCAATGGAGGGAGGAGAAGAAGCTGGAGCTGAGA
TAATGGTTGATTCAAAGGACTTGCAGCAACAAAGCAAAGCTTTAGACAAGCTTACCGATCGCGTCGAGGATCGCCAGCTCGATTCTAATCGTGT
TCAATCGGCTATGGCTTCGATTGGTGCTTCTAGGGAGGCTGATCTGAATGCTAAGAGATTGAGGGAGAAGGAACTGGCTTCTGTAAAGATCAAT
GCTGCAGATGTTGAGCTCGTTGTAAACGAACTCGAGCTGGAGAGGAATGTGGTGGAGAGAACTCTAAGGGAGCACAAAGGCGATGCAGTTGCTG
CAACTAGGGAATTGCTTTCTCGATATCCTCTTTGATCGATCAGTACCTGCTTTACTTCTTGCAGTTTCTTTTGTGTGTGTGTGAGGTTTGAGAG
ACGTGAGAGGAAGGTGTCCGAATATTGAACTCGTGTTTGAAGTTTCAGTATTGAACTTATGAGATATTATTGC |
Primers for UN48767 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGGGAGAAGGAACTGGCTT |
59.817 |
20 |
TTCGGACACCTTCCTCTCAC |
60.238 |
20 |
244 |
249 |
492 |
| 2 |
GAGGGAGAAGGAACTGGCTT |
59.817 |
20 |
ATTCGGACACCTTCCTCTCA |
59.655 |
20 |
245 |
249 |
493 |
| 3 |
GCTGCAACTAGGGAATTGCT |
59.481 |
20 |
TTCGGACACCTTCCTCTCAC |
60.238 |
20 |
120 |
373 |
492 |
|
|
