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Simple sequence repeat (SSR)
>UN48814
GGATAATAAAAAAATTTGCAGACATTATTTTGTTACTGTCTAATAATGAGTCAGAGAAGAAGAAGAAGATCATAAGAACATAAAAGGTTTAAGA
AGAGAAATGGTAAAAGTTCAAATAAGATGATGATAATATAACATTTAGATTTTTTTTCTTTTTTTGGCCTCTGAACAAAGTCTCAGGGAGCTTC
AAATGTCTCTCCCGCCAGGTTCTAACTCTTTTGGATCATAAGAACCGGGGCCTCCGATCCGCAGGCTTAAGAATTTGGAAAGAGCACATTAAAC
TCTCATCAACACTCATCATCGCACCAGCATTGTCGAATTCACCACAGTAGTTTGGAGCTCAAAATATAGTAACAAGCTGTCTATCTGCAAAGAA
CTCATAGCCATCCTCTACAACCTGGTGGGCACGACAGATGAGATCCATATCGTTCTTGATAAGAAACTCAGCAACTTTGTCAGGCCCAAACGTG
TAAGAGGCACCACGGTCGTTCATCCCCCAGCCTTTTACATCTTTGCTCGGATCAGACCAAAGCAGATCACATAGCAAACCGGTGTCCGGAACAT
CGGTAGGTCTCTTAATAGTCTTGATTTGCTCCACACTGGTCAAATCGGGAGAAAGGCCACCGTGCATACACAGTATCTTATCGTCTATCACAGC
AGCCACCGGGAGGCAGTTGAAAGAATCCGTAAACACTTTCCAGAGCCTCACGCTGAACCTGCGTTTGCACTCGTCGTAGAATCCGTAGATTCTG
TTGATGGAAGCGCACTCGTGGTTGCCTCTTAGGAGGAAGAAGTTCTCAGGGTATTTGATTTTGTAGGCGAGGAGGAGGCAGATGGTCTCTAAGC
TCTGCTTCCCGCGGTCCACGTAGTCTCCTAAGAAGAGGTAGTTGGCTGTAGGAGGGAAGCCTCCGTACTGTCCATGTATATCACCGCAGATCTT
GATGGGAGCTTCGAGCTCAAGGAGGTTAGGCTGTTGAAGGAAAATCTCTTTGGATACGAGACAAAGCTGTCGGATCTCAGACTCGTTGAGCATG
ACCTGTTTGGTTCCAGGCTTAGGGTTTCTGTAATCCAACAGACGACGGATGATGTCGTCGAGAACGGCAGGGTCCATGCTTCCCTGCGCCATTC
AAAAGAGAACACGGTCCAAAACAACACCCTTCTGTCTACACAACAAAAAGTTTCAACCTTTCAGACAGTAATCGATCGCGCAGATAGCCAAAAA
AGAAGATGATGATCTGTGTCTCGATCTTTGGACCATAAAAGTTTTCGCCTTTGTTTCCTCCAAGTTTACTTTTTTTTTTCTTTTTTCTTATTTC
CCC |
Primers for UN48814 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAAATTTGCAGACATTATTTTGTT |
57.511 |
25 |
TCCAAATTCTTAAGCCTGCG |
60.335 |
20 |
258 |
10 |
267 |
2 |
AAAAATTTGCAGACATTATTTTGTT |
57.511 |
25 |
CAAATTCTTAAGCCTGCGGA |
60.335 |
20 |
256 |
10 |
265 |
3 |
AAAAATTTGCAGACATTATTTTGTT |
57.511 |
25 |
AAGAGTTAGAACCTGGCGGG |
60.621 |
20 |
209 |
10 |
218 |
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