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Simple sequence repeat (SSR)
>UN48891
ATGACAAAACAGATGAATTTTATATATAATAAGAATTTATAGGACCGAATCAAACAACCAATACGACTACAAAGACGCAACAAAAAGAAGAGTT
TTCATAAAACGTGACTAGGTTGATTAGAGAGATCTCCAATGCTAAGAGTGGTCATCATCATCATCAACCTAGAAACAACCCTCTAGTTTCACTG
ACTCTCTTGATTGTTACACACGAAGACAAGATAACAGGAAAAGAGAACTGACTGAACTCTCTCTTTTTTAGCATGGACTTTACATGATGGTGCA
TCGACCCTTTTCTTCATTTGGTTGCGCCGGCATTTGCTGGAACCGGTGCGACTCTGAGGGATTGTATGTGAACTCAGATGTGTCAAGCCCATAC
TTCTCCCTCATACGTGCACTCCAAGGGTCACTGCGGCTCGGGCGTTGGTCCAAAGTAGGAGCGACTGGGACACCGGTGACAGGGGCGGGCTGGC
GGTTGATGAACGGCTGCCTGATCTGTTGCCTTGGAGGAGTAATAAACTCATCGTCACTGTCATACTCCGCTGGTGTATTAGCTGCCCTAACCAT
AAGGGCAAGCAAGAAAAGCAAAGCCTCGAAAACAACGGCTCCTAGAGCTACCCATCTTACGATGTTCCAGTTTTCTCTGAGAAAATTATAGATG
GTATCGAAGTTCCCAGTCCTGTCAGAAGGAATTTCATCTCTCCAGCTGTTGTCGAAGAATTTAAACGCAGCAGCTCCAAGCTCCGCCAAGATCA
ACAAGATGAGAAGCAGAGAGTAACAAGATAAGCAGCAGACGTTCCTTGAACAAGTTCCAACACAGCCGCAGCATGAAATAACAAACAGAGCCAC
TCCGATACCAATAAACAAGTAGATGAACCAAGCTTTGGGGAGATTGTCAAAGACATTGGAAGAGAGAGCAAGAGACATAAGCATGGGCCTCCCA
AAAGAGACGTAACTCTGGTGGTCGTCGGCACTGAAGTTAAGAGAGTTGTCGGATGCTCTCTTGAACTCGACAAACAAGTAGATACCATAACCAA
TCATGCCAAGTCCAGCAACCGCCAGAATAAAGTTTAGTAACTTTAGCAAACACTCCAAACAACCTCTACATGCCATTTTTTTACAACTCAGCTG
TTATATGGTTTTGTTCCGTTGGAAGAATTCTCGGAGAGTGGATTGCTTGAGATGATGAGTCTTCGATCTTCTTCGAGCTAAGGTCTCGGTGGAT
TAGTTTAGCTTTTATTTTTCTTGTCGCCGAGAGGAATGGGGAAAAGCCC |
Primers for UN48891 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGGACCGAATCAAACAACCA |
60.353 |
20 |
GAAGAAAAGGGTCGATGCAC |
59.676 |
20 |
257 |
41 |
297 |
| 2 |
AGGACCGAATCAAACAACCA |
60.353 |
20 |
GGTCGATGCACCATCATGTA |
60.362 |
20 |
248 |
41 |
288 |
| 3 |
AGGACCGAATCAAACAACCA |
60.353 |
20 |
CCAAATGAAGAAAAGGGTCG |
59.541 |
20 |
263 |
41 |
303 |
|
|
