 |
Simple sequence repeat (SSR)
>UN00477
GGAAAAGCTCTCTCATTCATTATCCTTCTCCATCAAAGAGAGAGAGAGCGTAATCATGAACGCCGTGGCATCGAGTTTCGCTCAATCTCCCTCC
TTTCTTCGTCCAACTCCCAAAACCGCCTCTGGTTCGATTCTCCTGACGTCAAGCTCCCCTGGCTTCATCCGATTCGATTCCGGACCTCAATTTC
GCCACAGAAACAGCTCTTGTCTTAAACTCTCGAGACCATCGCAAAGCCGAACAACTTCTCTCAAGTCTCGGACAAGCTTTGTCCTCAAAGCTTC
AGCTTCAGCTTCCGGTTCCGGTGATGCGTCCTCCGACTCAATCGCGCCGCTTCAGTTGAAGTCTCCCGTGGGGCAGTTTCTGTCGCAGATACTC
GTCAGCCATCCTCATCTCGTCCCAGCAGCTGTCGAACAACAGCTTGAACAGCTTCAAATCGACCGAGAAGCTGAGCAACAGATCAACAAAGACT
CTTCCTCCTCCTCTCTTCCTCCTACAACAGACATTGTTCTTTACAGGAGAATAGTTGAGGTTAAGGAGAAAGAGAGAAGAAGAGCTTTGGAAGA
GATTTTATATGCTTTAGTTGTTCAGAAGTTCATGGACGCTAATGTTTCACTTGTACCTTCCATTACCTCCTCCTCTGGGAGAGTTGATACTTGG
CCCACCCAAGACGGGACCTCGAGCAGCTTCACTCCCCCGAGGTTTACGAGATGATTCAGAATCATCTCTCCATCATTCTTAAAAACCGTGAGGG
TGATCTCTCCACCGTGGCGCAGATAAGCAAGCTCGGAGTCGGACAGGTCTATGCTGCTTCCGTCATGTATGGCTATTTCCTGAAGCGGATCGAC
CAGAGGTTTCAGCTCGAGAAGACGATGAAGATCCTTCCTGGTGGGTCAGATGTAGGAGGTGAGACTACTAGCATTGAGCGAGCCGGGAGGGAAT
CAGAGAGAAGCTTCTATGGAGAAGCAGAAGAAGAGAGTTATCAAGCTGTATCCTCAATGGGAGGGATTAATGCCAGTGGTGGTTCCAGCAGCGA
AACAACGAAACAGTCCCGGTTAAAGACGTACGTCATGTCCTTCGATGGAGAAACCCTTCAGAGATACGCTACGATTAGATCGAGAGAAGCGGTT
GGGATCATTGAGAAGCATACGGAGGCCTTGTTTGGGAGGCCGGAGATTGTGATAACACCGCAAGGGATTGATTCGTCCAAGGACGAGCATATAA
AGATCAGTTTCAAGGGACTGAAGAGGCTTGTGTTGGAGGCTGTGACGTTTGGTTCGTTCCTCTGGGATGTGGAGAGTCATGTAGATTCGAGGTA
TCACTTCGTACTGAACTGAAATTGTCTGTGTGTGTTTTTTGGTGATACTTGTAGTTTCTCTGGGAGGAGCTTTGGTGGGTTTTCTTTGTATTTG
TTGCTCTCTGAAAATTTAGATTCATCAATACCTAATGTTAAATTGCTGAATGAGCTGAGGTTTGCTTGC |
Primers for UN00477 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCTCATTCATTATCCTTCTCCA |
59.223 |
24 |
GAGAAGTTGTTCGGCTTTGC |
60 |
20 |
240 |
9 |
248 |
| 2 |
TCTCTCATTCATTATCCTTCTCCA |
59.223 |
24 |
AGCTGTTTCTGTGGCGAAAT |
59.882 |
20 |
195 |
9 |
203 |
| 3 |
TCTCTCATTCATTATCCTTCTCCA |
59.223 |
24 |
TGTTTCTGTGGCGAAATTGA |
60.234 |
20 |
192 |
9 |
200 |
|
|
