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Simple sequence repeat (SSR)
>UN48943
TATGTATTAAAACCCTTGAGAATGGTGAATCTAATGACAATGCAGGGTATCTTATATATATATGGCTTCATGTATTGAAAACAAAGTTGGGGTT
TCCATCTGATTGTATTCAGAGATACTGGTAACACAATGAATTGACATTAATAAGCAAAAAAATCAGCTGGTCAGAAATAGATAAACCTGCCGGC
TTCTCTTTCTCTCTCTCTCTCACCTTGCCTGCTTCATTTCATTCTGCTGTTACCTTGATCTGTCCATAGAGATTAGGGTCTGCTTCATAGTATA
CAACATCTCCTTCATCGCTCACAAAATGATCTTCTTTAATACTTTTTGCTAAGATTCCCAGTAAATGTAATGGCAAAGGTCCAGACTTATCAGG
CTCCCTGTAATACTTCCCTAATACTGGTTTAGCTGCTTCCGTTGCTTCTGCTAGATGGTAATGTGGGATCTGCGGGAAAAGATGATGTATCACA
TGAGTTCCAATGTCGTGATGGATGTTGTTGATCAATCCGTAGTCACGGTCCAATGTCGTAAGCCCTCCTCTCAAGTAACTCCATTCCTTCCCAC
GGTACCAAGGGAGCTTATCTTCATGACCATGGTGATGCAGGTAAGTCACAAAGTCCAACCACATTACATTTATCCAGTAAGGAACTACATAAAG
TTTGAGCATTTGCATAGGACCCATCACAAAGTTGAGGCAGACAAGCAGAGCAGCCATTGCAGTCCAACAAGCGGTAGATGTGAGAACATCATTT
CTCTCTTTAGGGAGGAACAAGTCGCTGTCCGGATGGTAATGAGAACCCTTCTTCCCCGGACTTCTTGCCCACAGTAGAAAGGGTAAGCGAGCAT
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Primers for UN48943 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGGGTTTCCATCTGATTGT |
60.173 |
20 |
TGTGAGCGATGAAGGAGATG |
59.942 |
20 |
218 |
88 |
305 |
| 2 |
TGGGGTTTCCATCTGATTGT |
60.173 |
20 |
TTTGTGAGCGATGAAGGAGA |
59.522 |
20 |
220 |
88 |
307 |
| 3 |
AAGTTGGGGTTTCCATCTGA |
59.381 |
20 |
TGTGAGCGATGAAGGAGATG |
59.942 |
20 |
222 |
84 |
305 |
|
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