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Simple sequence repeat (SSR)
>UN48957
ACCTTAAAACGATCTTTTAATCATGACAATGGTAACGATACATGCTTGACGAGAAAGTAAAACAGTTTCACAGCGTCAAAAGATGGTAAAGAGT
AATAGTATGTGCAGGTTTTGGAACTAGACACATGGCTACAACACTCTCTCTTAGTAGCAGAGTGTTTCAGATGTTGGGCCCTGACCTAAGAACC
TTTTCCAGCTTCTCAGCCTTAAGGTAGTCAATCTCTGTAAGCGGACCAGCAGGAAAAGGTGTGATCTCAACCACCAAATGTGGCGTCGGTAACT
CATCAAACAGAGCTCTCACGTTGTTGCAACAGACGCTCTGACCGTGGGCACTCTCTCGCCGTATTTGACAGCCCTTGTAAGATGTTGCATCTCT
AAAGTGGTCATCATCTGAGAGAAGAGAGGCAATGGCTTTGAGGAGACGGTTTCCTTCACCTTTGGAAGGTACCCTGTAGTTCCTTCTAAGTGTT
CCCTTTGTCGTTGGGTGCCATTTGCTCACTAGCTTCCTCTTATCAGCTGCATCCTTATCTGGTTTGCCCTTAATGTACTGAATCCACTTGGAGA
AACCAAGATCCACAGCAGCAGTACCATCATCTTCAACATCAACACCGCCACTCTCCAAACCAGAGACGATGGGGTTAGACTTGGATCCAGCTAA
ACCAGCTCTGACGAGGGCGTAAAAGACGCAGATTCGACCAGCCCACAAGACAGGCGTCTCGAGCAAGGAAGCGCGAGGAGACCCGTTTGAGGAT
TTCTTCGTGGAGCGAAAGATCCGGTGGAAAGGTGTTAACTTGGTCGAATCAGGAAAGATTGACTTTTGGAGAAGTATACCAGAGGAGGAGGAGG
AGGGCTTAGGAAGAGTTGATTGGGATCTCAAGTAGGACACTGAAGCGGCTTGGACTAGTGACAGTGGCATTGCTTTCTTCTTTGTTTTTTTTCT
TTGGGCGGCGCAAAGAGAATCTTACGGGTCC |
Primers for UN48957 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGAGACCCGTTTGAGGATT |
59.935 |
20 |
CGTAAGATTCTCTTTGCGCC |
59.982 |
20 |
233 |
734 |
966 |
2 |
AGGAGACCCGTTTGAGGATT |
59.935 |
20 |
GTAAGATTCTCTTTGCGCCG |
59.982 |
20 |
232 |
734 |
965 |
3 |
AGGAGACCCGTTTGAGGATT |
59.935 |
20 |
CCCGTAAGATTCTCTTTGCG |
59.839 |
20 |
235 |
734 |
968 |
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