 |
Simple sequence repeat (SSR)
>UN49001
TGGACAGGCCCATTACACAGCCCATGTCAAGCAGGAAATCTATCAATGCTCATAAGATGTACAAACTGTTTATGGTAGCGTCTCTCCTCATAGG
TATATATATATATAACCTACGGGTACATGATATTTACCTGTTCTTGAAGATAACATTTTCTAATCCTTGAGAGTCTTACCCAGAGTTATCTTGC
TCGAGTTTTGCAACTACAGCTTTTTCTCATCTTCCGGAAGAGCCATGAACATGAAAACAGATTTATCCCCAATATCATCCTTAATAGGCTGAGT
GAATTTCCTTCCAGCAAATACTACAAAGAGTGCCATCCATGTTCCTAGTAACACCAGTTTCGCCTCATCATTCATCAGGCCACTCAAATGCCCG
AGAAGTACTGAGGGTATGATGAATGTAAGAAGGCCAGCTTCTAGCTTACCGTAACAGAGCCCTTCTTTGAAAACGAGCCCAGTGAGGGAAGCGA
AAAGAGGACCAACAAACCAAACAGCAGTTGGATGACCAACGACATAATGAACCAAGCTATCACTGGCTGGTCTAGCAAGGGCAGCGTAAGTGGC
GAACGAACCAACAACACCAAGTGCCCATAAAGCCTGAAGAGTCCTCTTGATCTCCGTTACATAGATATGAATAAGAAACAGAGAAAGCCCCAAA
CCACCAGCACCAACAAGGTAGAACAAGTCCTGGTTTTGCTTGATTGTTTCACTCAGCCATGAGTTCTCCGGTAGAAAGGCGGCAGAAGAAGCGG
TAACAAAGGAGGCAGCAGCAGTTACAAGTCCTGATCTGTACAGAACAACCTCTTTGACATCGGACTGTTCGACGGTCCAGGGACCGTAAACGCC
TTTGTAAGCGGTTTCTCCTTGAGAGCTGTTGCTCACTGCCCTGATACTAAGCCTTCCCTTTCTCAGCTTAACGATAGTTGTTAGATTCGCCGAC
GATTTGTTGAGATTGGGCGGCGGTGTGATGAGTGTGGTTGATAACAAACGCGAGGCCATACTCTCAGCGAATTGATTATCC |
Primers for UN49001 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTACACAGCCCATGTCAAGC |
59.722 |
20 |
TCCGGAAGATGAGAAAAAGC |
59.387 |
20 |
214 |
13 |
226 |
| 2 |
CCATTACACAGCCCATGTCA |
60.39 |
20 |
TCCGGAAGATGAGAAAAAGC |
59.387 |
20 |
217 |
10 |
226 |
| 3 |
CCCATGTCAAGCAGGAAATC |
60.461 |
20 |
TCCGGAAGATGAGAAAAAGC |
59.387 |
20 |
206 |
21 |
226 |
|
|
