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Simple sequence repeat (SSR)
>UN49054
TTTTTGAGAAATCCAAAGGGTCAGAAAATAAATAACAGTCGCCATGGCAGTCTCGGCAGCATTCAACACTTCGAAACTTGCATCTTCGTCTTCT
CTAGATTCGATTCCTTCAATCTCTCCTTCTTCTTCTTCTTATTCGTTGTTTCCGGCAAGCATCGGCATCAGAAACTCCGTCGGATCTCCTTTCA
AGAGATGTCTAAAGCAGTCGTGTTCTTCTGTTCGAGCCATGTCTTCTTCTTCTTCGGCTGCTTCTTCTTCGTCTTCTTCTTTTGGATCGAGAAT
GGAGGAGAGCGTGAGGAAGACGGTTACTGAGAACATTGTCGTTGTTTACTCCAAAACTTGGTGCTCATACTGTACTGAAGTGAAGACATTATTC
AAGAGACTTGGAGTTCAGCCACTGGTGATTGAATTGGATCAACTTGGTCCACAAGGGCCACAACTGCAGAAGGTACTGGAAAGACTTACTGGCC
AACACACTGTTCCTAATGTTTTCGTTGGAGGAAAGCACATTGGTGGCCGCACAGATACAGTGAAGCTGAACAGGAAAGGAGAACTTGAACTGAT
GTTAGCTGAAGCCAACGCTAAAACCGATCAAACTTAAGTAGATGTTGGAAACTGGTAATGGATGGAGATTTTGCATACGGAGTTTGGAAGAGTT
TTTTTCTCTTTTGTAAACCATTGAACCCTCACTTTCTTTTGTCAATGCATTTATCACCATTC |
Primers for UN49054 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGAAACTTGCATCTTCGTC |
59.002 |
20 |
ATCCGACGGAGTTTCTGATG |
60.073 |
20 |
109 |
71 |
179 |
| 2 |
TCGAAACTTGCATCTTCGTCT |
60.008 |
21 |
ATCCGACGGAGTTTCTGATG |
60.073 |
20 |
109 |
71 |
179 |
| 3 |
TCGAAACTTGCATCTTCGTC |
59.002 |
20 |
CTCCTCCATTCTCGATCCAA |
60.15 |
20 |
219 |
71 |
289 |
|
|
