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Simple sequence repeat (SSR)
>UN49099
GGATCTTAGCTCTTTTAACTAACCCCCCGCTTCTTTGGACTTCTCTAGCTAGCTCGCTGCCTTGTTCTTCCAATGGAGTCTTCTGCAGCTCTCG
GATCTCTCCCTCAGACTTTTGGTTCCCCCATAAATGTTCACTCGCTTTCTGGTAACTGGTCTGCCTCTGGTAATTCTTGTGCGCCACGGTGGAG
TTTGTTCAACAGGAACACCAAGTACACGTTTGTTTTACGTGCAGAGTCCTCTAAATCTTCCACAACAACAACCAAAACTGATGGTGACATTATA
TTATCTTTCACCTTTCATCTTGGAATAGAGCCAGAAAAATATACAAAGACGTTACTACTGGAACATGTTTTCCTTTCTAATAGCGTTTGTTTAT
CTTCTTTATTTATGTTTGCAGAATCATGTGATGCTTCAACGGGGAAGGGTACTGTTCGACGCACAACGTTCCCGAAAGAAGTGGAGGCACTGGT
TCACGAGATGTGTGATGAGACTGAGGTTGCTGTGCTCAAACTCAAGGTTGGAGATTTCGAGATGAACTTAAAGCGGAAGATTGGACAGACCGCA
ACTCCCATTCCTGTGCCTGATATTTCTCCATCAGTAGCTCCTCCGATTCCTTCTGAGCCCATGAACAAATCAGTTTCTGCTGCTGCTGCTGCTA
GCCCATCCAAAGCAAAACCTGCCTCTGAAAAAGTGTCTCCATTTATTAATGCTGCATACCGAAAATCATCAAAGTTGGCTGCTTTGGATGCATC
TGGATCTAACAACTATGTCCTAGTCACCTCTCCCTCAGTATGAGAAACCCCACCTCCTGCAATTCATATAAATTTTATCTGCATTTTGATCTTT
TATTTCTTCTCTTGGTAAAAGGTGGGCAAGTTTCAGAGAAGCAGAACTGTAAAGGGAAAGAAACAAGGTCCTAGCTGCAAAGAGGGTGATGCAA
TAAAGGAAGGGCAAGTGATTGGATACGTACATCAGCTGGGAAAAGAACTTCCAGTAACGTCTGATGTAGCTGGTGAAGTTCTCAAGCTTCTTTC
AGATGATGGAGACTCTATAGGGTATGGGGAGCCTCTGGTTGCGGTCTTGCCATCGTTCCATGATATCAACATCCAGTGATGATGTCAGGGCCCA
GTTCCACAATAAATTAGTAGCATCTTCATCTGGAGACTGTACTCTTCTTCCTCTTTCCTTTTATGGAGTTTGAGATTCTATTTTGATCTTCATC
TTGATCACATGATTTGTGTGGAGATTTAATTCCTGAACATGTGACACGCAGCTATATTGTTTTTGTCACTCTTTGGAATTTTGGTTCATCTTAA
TATGGGATCATCTATTTTTTTCTGCACCAGAGAAAAAAATAACTATAGATTGTTGAAATGAGCATATAACTTGAC |
Primers for UN49099 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGAGGTTGCTGTGCTCAAAC |
60.032 |
20 |
TCAGAGGCAGGTTTTGCTTT |
59.993 |
20 |
195 |
492 |
686 |
| 2 |
TGAGGTTGCTGTGCTCAAAC |
60.032 |
20 |
TTTCAGAGGCAGGTTTTGCT |
59.993 |
20 |
197 |
492 |
688 |
| 3 |
GGTTGCTGTGCTCAAACTCA |
60.032 |
20 |
TTTCAGAGGCAGGTTTTGCT |
59.993 |
20 |
194 |
495 |
688 |
|
|
