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Simple sequence repeat (SSR)
>UN49124
GGACTCTGTTTCTCTACCACTCCAAAGTTTCTAAAGTAGTAGAAAGATGATGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAAC
TGTGCCGACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCCCCACCACTATCCCGGCTTCTTCTCCAATTCTTCCACGATTA
ACGGCGGCGATATCGACGGCTTTCTAGCGTCGGCCGGTTTAGAGCTTCCGGCGATTTATGGGGAGACGACGGTGCACGGTGACGCGAGAATCTC
TGTTACTCCGGGAAATATTACAACTGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGATACAGAGACTAAGGTTTGTAATGAGAAG
AAGAAGATGATGATGATGATGATGAACAGAGAAGCAGCAGTTGAGGAGGAAGAAGAAGAAGAGAAGTCGAAAGACTCGCAGAGAACAGATTATA
TTCATGTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACGAGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCT
ACAAGATTTAGTTCCTGGATGTGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATCATTAACTATGTTCAGTCTCTTCAGCGACAAGTC
GAGTTCTTATCGATGAAGCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTGCCAAAGAGGTTGTTTCAGCTCCAATGA
CGAACTTACCAAACACTGTGATGCCACCTCATATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATTCCGGTTATGTTCATTTCAATCC
AATGCAACAAGTGGTTGCTAGTTCTGATCCACTATCATGTTTCAACAATGGTCAATCAGCTGCTAATGTGTGGGACTCTGATGTGCAGAATCTT
TATAGCAGTCTAGGTGTTTGATTTAAAAGTGTTCCTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTTTTCAAGTGGG
AAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAAAGTTAGCAGTTATTTACTAATTTCAGTAAATTAATTTAAGATTTTCAGCCCATC
ATTGTAGTATCAGAGACAAGAGTGTATACAGTATTGTGTGTATAGATGCCAAACAAT |
Primers for UN49124 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TATCGACGGCTTTCTAGCGT |
60.003 |
20 |
TTCCTCCTCAACTGCTGCTT |
60.134 |
20 |
229 |
199 |
427 |
| 2 |
TTGGTTGCGTCGATACAGAG |
59.864 |
20 |
GTTCTGCAATGCTGTGGCTA |
60.019 |
20 |
189 |
336 |
524 |
| 3 |
TTGGTTGCGTCGATACAGAG |
59.864 |
20 |
TCTGCAATGCTGTGGCTATC |
59.979 |
20 |
187 |
336 |
522 |
|
|
