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Simple sequence repeat (SSR)
>UN04648
TTTTTTTCAGAGATCGACGAAGAACAAAATTTAGGCGAAAAAAAAAATAAAATGCTGGCTAGGGTTTGTAGATTCAAGTCTTCTTCTTCTTCTT
CTTCTTCTCCTGCTGTGTCTGCGGCTAGATTGTTCTGTACGAGATCGATTCGTGATACTCTGGCCAAGGCAAGCGGAGAGAGTTGCGAAGCAGG
TTTTGGAGGAGAGAGTTTGAAGCTGCAAAGTGGGTTTCATGAAATCAAAGGTTTAGAGGATGCGATTGATTTGTTCAGTGACATGCTTCGATCT
CGTCCTTTACCTTCTGTGGTTGATTTCTGTAAATTGATGGGTGTGGTGGTGAGAATGGAACGCCCGGATCTTGTGATTTCTCTCTATCAGAAGA
TGGAAAGGAAACAGATTCGATGTGATATATACAGCTTCACCATTCTGATAAAATGTTTCTGCAGCTGCTCTAAGCTCCCCTTTGCTTTGTCTAC
ATTTGGTAAGATCACCAAGCTTGGACTCCACCCTGATGTTGTTACCTTCAACACCCTGCTCCACGGATTGTGCGTGGAAGATAGGGTTTCTGAA
GCTTTGAATTTGTTTCATCAAATGTTTGAAACGACATGTAGGCCCAATGTCGTAACCTTCACCACTTTGATGAACGGTCTTTGCCGCGAGGGTA
GAATTGTCGAAGCCGTAGCTCTGCTTGATCGGATGATGGAAGATGGTCTCCAGCCTACCCAGATTACTTATGGACAATCGTAGATGGGATGTGT
AAGAAGGAGATACTGTGTCTGCA |
Primers for UN04648 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAATGCTGGCTAGGGTTTGT |
58.72 |
20 |
GACGAGATCGAAGCATGTCA |
59.95 |
20 |
237 |
50 |
286 |
| 2 |
AAATGCTGGCTAGGGTTTGT |
58.72 |
20 |
CTTGCCTTGGCCAGAGTATC |
59.836 |
20 |
118 |
50 |
167 |
| 3 |
AAATGCTGGCTAGGGTTTGT |
58.72 |
20 |
AGGACGAGATCGAAGCATGT |
59.834 |
20 |
239 |
50 |
288 |
|
|
